Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL139395.1-201ENST00000603662 160 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 AC005344.1-201ENST00000613391 459 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 AC122133.1-201ENST00000613964 233 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 AL031667.3-201ENST00000620124 655 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 AC022079.1-201ENST00000621546 602 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 AC079248.2-201ENST00000623779 326 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 MAPK10-372ENST00000641954 3413 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HERC6Q8IVU3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HERC6Q8IVU3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.35□□□□□ -1.71
HERC6Q8IVU3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HERC6Q8IVU3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
HERC6Q8IVU3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
HERC6Q8IVU3 RNA5SP72-201ENST00000364442 117 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 RHOT1P2-201ENST00000366423 333 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 MIR183-201ENST00000384958 110 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HERC6Q8IVU3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 AIMP1P1-201ENST00000418670 937 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 AC004552.1-201ENST00000419089 348 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 AC092647.1-201ENST00000420654 287 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 RPL7P30-201ENST00000420888 709 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 AC006548.1-201ENST00000427470 102 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 AL358472.1-201ENST00000431295 329 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 AL590103.1-201ENST00000434488 307 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 HLA-N-201ENST00000437516 135 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 HMGB1P15-201ENST00000453854 435 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.35□□□□□ -1.71
HERC6Q8IVU3 RNU7-125P-201ENST00000458760 62 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 RPS26P3-201ENST00000470205 348 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 AC090543.2-201ENST00000483963 348 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 AC004057.1-201ENST00000485827 348 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.35□□□□□ -1.71
HERC6Q8IVU3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.35□□□□□ -1.71
HERC6Q8IVU3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.35□□□□□ -1.71
HERC6Q8IVU3 AC026427.2-201ENST00000506228 536 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 VWA8P1-201ENST00000510889 176 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.35□□□□□ -1.71
HERC6Q8IVU3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.35□□□□□ -1.71
HERC6Q8IVU3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.35□□□□□ -1.71
HERC6Q8IVU3 AC091516.1-201ENST00000549191 703 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 GTF2IP22-201ENST00000554443 182 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 AC025627.2-201ENST00000576220 160 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.35□□□□□ -1.71
HERC6Q8IVU3 CR381572.1-201ENST00000625098 102 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
HERC6Q8IVU3 AP004289.2-201ENST00000444413 1457 ntBASIC4.35□□□□□ -1.71
HERC6Q8IVU3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HERC6Q8IVU3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HERC6Q8IVU3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HERC6Q8IVU3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
HERC6Q8IVU3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HERC6Q8IVU3 RNU1-15P-201ENST00000353977 144 ntBASIC4.34□□□□□ -1.71
HERC6Q8IVU3 RNU6-28P-201ENST00000362378 107 ntBASIC4.34□□□□□ -1.71
HERC6Q8IVU3 SNORD116-8-201ENST00000384365 95 ntBASIC4.34□□□□□ -1.71
HERC6Q8IVU3 MIR513A2-201ENST00000385249 127 ntBASIC4.34□□□□□ -1.71
HERC6Q8IVU3 DHFRP6-201ENST00000401776 268 ntBASIC4.34□□□□□ -1.71
HERC6Q8IVU3 MIR320C1-201ENST00000408566 88 ntBASIC4.34□□□□□ -1.71
HERC6Q8IVU3 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.34□□□□□ -1.71
HERC6Q8IVU3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.34□□□□□ -1.71
HERC6Q8IVU3 UBE2FP3-201ENST00000436366 524 ntBASIC4.34□□□□□ -1.71
HERC6Q8IVU3 UBE2D3P1-201ENST00000436669 444 ntBASIC4.34□□□□□ -1.71
HERC6Q8IVU3 AC005297.2-201ENST00000450430 606 ntBASIC4.34□□□□□ -1.71
HERC6Q8IVU3 AL645939.1-201ENST00000453429 797 ntBASIC4.34□□□□□ -1.71
HERC6Q8IVU3 RPL36AP13-201ENST00000457490 317 ntBASIC4.34□□□□□ -1.71
HERC6Q8IVU3 snoU109.4-201ENST00000458953 143 ntBASIC4.34□□□□□ -1.71
HERC6Q8IVU3 AC104563.1-201ENST00000476147 376 ntBASIC4.34□□□□□ -1.71
HERC6Q8IVU3 BET1P1-201ENST00000482276 359 ntBASIC4.34□□□□□ -1.71
HERC6Q8IVU3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.34□□□□□ -1.71
HERC6Q8IVU3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.34□□□□□ -1.71
HERC6Q8IVU3 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.34□□□□□ -1.71
HERC6Q8IVU3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.34□□□□□ -1.71
HERC6Q8IVU3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.34□□□□□ -1.71
HERC6Q8IVU3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.34□□□□□ -1.71
HERC6Q8IVU3 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.34□□□□□ -1.71
HERC6Q8IVU3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.34□□□□□ -1.71
HERC6Q8IVU3 VN1R90P-201ENST00000595717 726 ntBASIC4.34□□□□□ -1.71
HERC6Q8IVU3 BBIP1P1-201ENST00000602999 279 ntBASIC4.34□□□□□ -1.71
HERC6Q8IVU3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.34□□□□□ -1.71
HERC6Q8IVU3 RMST_9.1-201ENST00000619945 193 ntBASIC4.34□□□□□ -1.71
HERC6Q8IVU3 AC018816.2-201ENST00000621460 353 ntBASIC4.34□□□□□ -1.71
HERC6Q8IVU3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.34□□□□□ -1.71
HERC6Q8IVU3 U6.105-201ENST00000637379 88 ntBASIC4.34□□□□□ -1.71
HERC6Q8IVU3 AC027287.1-201ENST00000553115 1453 ntBASIC4.34□□□□□ -1.71
HERC6Q8IVU3 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.34□□□□□ -1.71
HERC6Q8IVU3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HERC6Q8IVU3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms