Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SNORA26.7-201ENST00000391288 122 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 AL356967.1-201ENST00000406305 431 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 AL139281.1-201ENST00000422120 335 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 RPF2P1-201ENST00000424137 906 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 AC096632.1-201ENST00000427395 310 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 RPL31P54-201ENST00000429803 370 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 TRIM60P18-201ENST00000441518 828 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 RPL36AP33-201ENST00000450395 310 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 AC104308.1-201ENST00000454621 333 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 SNORA84-201ENST00000459229 133 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 VN1R17P-201ENST00000472048 1090 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 ZNF971P-201ENST00000562068 1249 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 AC074051.3-201ENST00000570238 358 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 MTCO3P13-201ENST00000577757 781 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 ZNF415P1-201ENST00000582279 1166 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 AC012119.1-201ENST00000603184 222 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 AC090116.1-201ENST00000615679 446 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 AC068880.4-201ENST00000623082 495 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 AC093010.3-201ENST00000570269 15214 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 AC092447.7-201ENST00000422212 1621 ntBASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 RNU5B-1-201ENST00000363286 116 ntBASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 AC234772.1-201ENST00000377927 937 ntBASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 MIR1250-201ENST00000408098 113 ntBASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 RNA5SP56-201ENST00000410277 118 ntBASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 EI24P1-201ENST00000416584 867 ntBASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 SFR1P2-201ENST00000421841 730 ntBASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 AL035410.1-201ENST00000427409 427 ntBASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 UBE2V1P6-201ENST00000430840 422 ntBASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 HIGD1AP11-201ENST00000438361 280 ntBASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 RPS4XP10-201ENST00000465034 731 ntBASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 MTCYBP37-201ENST00000510642 1133 ntBASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 AP001207.1-201ENST00000524051 481 ntBASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 OR4A45P-201ENST00000529954 901 ntBASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 OR8K4P-201ENST00000534608 872 ntBASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 AL163153.1-201ENST00000554223 283 ntBASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 AC078899.3-201ENST00000599065 212 ntBASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 IGHV3-29-201ENST00000604817 344 ntBASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC50Q8IVM0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 MTCO1P12-201ENST00000414273 1543 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 ZNF734P-201ENST00000419494 1534 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 MTND4P34-201ENST00000572715 1371 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 SNORA63.3-201ENST00000362682 132 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 SNORA7.2-201ENST00000364446 145 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 RNU6-468P-201ENST00000384003 109 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 AC005019.1-201ENST00000436455 431 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 RPL39P40-201ENST00000445481 146 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 AC044797.1-201ENST00000445744 679 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 snoU13.3-201ENST00000459441 104 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 AC008155.2-201ENST00000464337 397 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 RN7SL293P-201ENST00000481765 281 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 AC006483.1-201ENST00000487308 313 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 AC091860.1-201ENST00000505723 432 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 AC048346.1-201ENST00000510247 144 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 MTCO3P27-201ENST00000514397 196 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 RN7SKP43-201ENST00000516173 320 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 RN7SKP157-201ENST00000516174 282 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 RNU6-885P-201ENST00000516607 104 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 RN7SKP282-201ENST00000516824 299 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 MIR2682-201ENST00000580305 110 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 AC002487.1-201ENST00000604565 994 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 AC107871.2-201ENST00000612894 502 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms