Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC093913.1-201ENST00000614178 329 ntBASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 SNHG22-203ENST00000617833 660 ntBASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 AC233309.1-201ENST00000619522 751 ntBASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 BMS1P21-201ENST00000634565 365 ntBASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 OR4G1P-203ENST00000641984 1631 ntBASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 AC012618.3-205ENST00000637896 1496 ntBASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 EXOC5P1-201ENST00000510543 1969 ntBASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 AC090337.1-201ENST00000579651 2074 ntBASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 RNU6-1155P-201ENST00000363554 107 ntBASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 RNU6-738P-201ENST00000384531 106 ntBASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 MIR606-201ENST00000384851 96 ntBASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AL162389.1-201ENST00000449233 177 ntBASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AC008481.1-201ENST00000463278 396 ntBASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 RN7SL432P-201ENST00000484057 298 ntBASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 EIF4EP3-201ENST00000498782 656 ntBASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AC108145.1-201ENST00000503770 153 ntBASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 RNU4-29P-201ENST00000515943 174 ntBASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 BNIP3P6-201ENST00000549284 499 ntBASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AC011611.1-201ENST00000552179 197 ntBASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AC243960.4-201ENST00000600532 288 ntBASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AC025857.2-201ENST00000602711 238 ntBASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AL034351.1-201ENST00000605288 668 ntBASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AC087385.3-201ENST00000620477 187 ntBASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 uc_338.7-201ENST00000621834 124 ntBASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 MIR1302-1-201ENST00000637932 143 ntBASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AL356489.2-201ENST00000566968 3528 ntBASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AL034549.2-201ENST00000618285 3373 ntBASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
NPAS4Q8IUM7 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 SNORA62.1-201ENST00000364287 154 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 RNA5SP455-201ENST00000365190 119 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 RNA5SP87-201ENST00000384155 118 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 RPL26P29-201ENST00000415623 438 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AL161631.1-201ENST00000417933 486 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AC099677.1-201ENST00000420575 175 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AL353678.1-201ENST00000422735 741 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 GPM6BP2-201ENST00000432046 144 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AC073465.2-201ENST00000440938 498 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 GPM6BP1-201ENST00000446387 144 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AC073415.1-201ENST00000449240 153 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AC083899.1-201ENST00000454465 3819 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 MRPS17P3-201ENST00000465453 385 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AP000797.2-201ENST00000475768 606 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms