Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.16□□□□□ -1.58
UBE3DQ7Z6J8 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.16□□□□□ -1.58
UBE3DQ7Z6J8 TPTE2P4-201ENST00000258589 1605 ntBASIC5.15□□□□□ -1.58
UBE3DQ7Z6J8 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.15□□□□□ -1.58
UBE3DQ7Z6J8 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.15□□□□□ -1.58
UBE3DQ7Z6J8 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.15□□□□□ -1.58
UBE3DQ7Z6J8 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
UBE3DQ7Z6J8 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
UBE3DQ7Z6J8 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
UBE3DQ7Z6J8 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
UBE3DQ7Z6J8 RNU6-1115P-201ENST00000362490 106 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 RNU6-1287P-201ENST00000362914 107 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 Y_RNA.193-201ENST00000363979 102 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 RNU6-1078P-201ENST00000364522 103 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 RNU6-61P-201ENST00000365528 109 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 RNU6-1060P-201ENST00000384664 107 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 MIR568-201ENST00000385036 95 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 RNU6-328P-201ENST00000390887 106 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 AL133388.1-201ENST00000404509 287 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 RNU6-847P-201ENST00000411115 108 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 GSTM5P1-201ENST00000434751 660 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 AC020550.1-201ENST00000447385 163 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 RPS27AP1-201ENST00000475545 471 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 AC002456.2-201ENST00000509356 380 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 SNORA25.10-201ENST00000515926 124 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 RNU6-189P-201ENST00000516120 101 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 AC138761.3-201ENST00000579993 334 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 AC024619.4-201ENST00000580924 316 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 AL589674.2-201ENST00000604304 337 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 AC012443.1-201ENST00000605605 231 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 AC012409.4-201ENST00000612923 249 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 uc_338.7-201ENST00000621834 124 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 AL445363.3-201ENST00000623080 671 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 BCORP1-203ENST00000513194 5093 ntBASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
UBE3DQ7Z6J8 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 MTND4P1-201ENST00000457501 1466 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 ZNF734P-201ENST00000419494 1534 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 AC109446.4-201ENST00000623235 2755 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 MIR133B-201ENST00000362210 119 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 RNA5SP319-201ENST00000362768 119 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 RNA5SP335-201ENST00000363817 110 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 SNORD116-11-201ENST00000383882 92 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 MRPL42P3-201ENST00000401492 326 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 RNU2-21P-201ENST00000410368 188 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 RN7SKP58-201ENST00000411010 305 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 BX323014.1-201ENST00000412876 237 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 RPL7P46-201ENST00000425129 740 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 RPS17P13-201ENST00000448974 407 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 PPIAP3-201ENST00000450588 505 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 MRPS31P2-201ENST00000451581 518 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 AC011225.1-201ENST00000457751 369 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 AC022034.3-201ENST00000471393 478 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 AC100832.1-201ENST00000471945 383 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 AC092754.1-201ENST00000472975 479 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 AC058823.1-201ENST00000485315 474 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 RN7SL184P-201ENST00000488308 297 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 AC104109.1-201ENST00000498563 436 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 HMGB1P21-201ENST00000502313 581 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 MRPS35P2-201ENST00000508242 191 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 RNU6-798P-201ENST00000516912 103 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 RNU6-1092P-201ENST00000516955 87 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 SCARNA16.4-201ENST00000516956 187 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 RNU6-1137P-201ENST00000517073 99 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms