Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 RNU6-1074P-201ENST00000383995 104 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 SNORD3H-201ENST00000384486 214 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 U3.29-201ENST00000391296 212 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 RNU6-628P-201ENST00000410675 107 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AL691449.1-201ENST00000426570 421 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AL117339.2-201ENST00000430475 180 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 MTCYBP34-201ENST00000439552 670 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AL451050.1-201ENST00000450126 415 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 RPL7L1P8-201ENST00000469911 741 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 MTCYBP35-201ENST00000503630 1137 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AC010625.1-201ENST00000511296 403 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AC006499.2-201ENST00000513470 337 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AC026407.1-201ENST00000518369 204 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 OR4P1P-201ENST00000530808 1136 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 OR8R1P-201ENST00000543943 764 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AL133457.1-201ENST00000564251 987 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AC006254.3-201ENST00000603353 884 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AC112220.3-201ENST00000605502 502 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 Z99289.3-201ENST00000605586 594 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AL450489.1-201ENST00000612071 468 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AL355810.1-201ENST00000614629 552 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AL139089.1-201ENST00000620372 975 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AC068724.3-201ENST00000625906 87 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AL773545.4-201ENST00000637262 310 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 AL513478.4-201ENST00000641636 310 ntBASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NUP54Q7Z3B4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 RPL23AP29-201ENST00000397284 453 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 RSL24D1P4-201ENST00000400938 484 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 AL590704.1-201ENST00000402856 794 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 HMGB1P17-201ENST00000403495 628 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 PPIAP31-201ENST00000405422 495 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 RN7SKP263-201ENST00000411194 309 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 AC005005.2-201ENST00000420779 380 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 AC012065.2-201ENST00000421295 375 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 AL049610.1-201ENST00000423374 372 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 RPL21P89-201ENST00000444021 467 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 RSL24D1P3-201ENST00000449255 495 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 AC004263.1-201ENST00000479327 332 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 RPL31P61-201ENST00000496160 376 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 AC096751.1-202ENST00000502691 1067 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 XKRY-201ENST00000510392 1100 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 HSPA8P13-201ENST00000523715 472 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 AC009094.1-201ENST00000564443 426 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 AL109653.1-201ENST00000603091 248 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 AL592436.1-201ENST00000605135 558 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms