Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.01□□□□□ -1.77
ZNF549Q6P9A3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4□□□□□ -1.77
ZNF549Q6P9A3 OR11H4-201ENST00000315409 1082 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 RNU5E-5P-201ENST00000365379 116 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 RNU5A-6P-201ENST00000384136 116 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 RNU6-1151P-201ENST00000384684 107 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 HSPE1P12-201ENST00000412576 301 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 B3GALNT1P1-201ENST00000420569 975 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 AC099336.2-201ENST00000422457 254 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 GLRXP1-201ENST00000423261 334 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 TRAPPC2P5-201ENST00000426293 308 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 HMGB1P31-201ENST00000437242 427 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 NUTF2P3-201ENST00000448540 384 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 HMGB3P22-202ENST00000451823 572 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 AC099560.2-201ENST00000457554 255 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 RPL31P58-201ENST00000469001 379 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 RPL23AP71-201ENST00000470966 469 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 ARL2BPP6-201ENST00000512757 439 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 AC025627.2-201ENST00000576220 160 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 MIR378J-201ENST00000611988 109 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 AC104010.1-201ENST00000616889 150 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 AC104985.2-201ENST00000620598 500 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 DUXAP9-208ENST00000622815 614 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 CRYM-AS1-204ENST00000637983 556 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ZNF549Q6P9A3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ZNF549Q6P9A3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4□□□□□ -1.77
ZNF549Q6P9A3 LINC00561-201ENST00000565815 2738 ntBASIC4□□□□□ -1.77
ZNF549Q6P9A3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 OR52B1P-201ENST00000316506 909 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 Y_RNA.25-201ENST00000362528 102 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 RNU6-462P-201ENST00000362659 105 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 RNU5F-7P-201ENST00000363696 115 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 RNU6-317P-201ENST00000384031 107 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 RNU6-178P-201ENST00000384631 104 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 SNORA40.3-201ENST00000390964 122 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 CIR1P3-201ENST00000405137 479 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 AL590290.1-201ENST00000405336 380 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 AIMP1P1-201ENST00000418670 937 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 AL109913.1-201ENST00000421173 514 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 RPS27AP14-201ENST00000422868 454 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 C4BPAP2-201ENST00000428434 478 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 AC073069.1-201ENST00000428657 441 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 AC016712.1-201ENST00000431088 378 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 BMS1P19-201ENST00000433925 393 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 HMGB3P9-201ENST00000441799 583 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 AL662791.1-201ENST00000441992 928 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 RPL21P71-201ENST00000465598 459 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 LARP1BP2-201ENST00000486594 519 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 UBA52P3-201ENST00000491303 382 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 FCF1P3-201ENST00000496394 590 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 RNU6-583P-201ENST00000516012 92 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 RNU6-314P-201ENST00000516574 104 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 RN7SKP283-201ENST00000517197 270 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 PAICSP4-201ENST00000517543 1253 ntBASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.99□□□□□ -1.77
ZNF549Q6P9A3 AC068714.1-201ENST00000559623 800 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms