Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 SNRPEP2-201ENST00000397592 279 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 RPS3AP36-201ENST00000398190 775 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 CALM2P3-201ENST00000400429 449 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.98□□□□□ -1.61
KRT40Q6A162 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.98□□□□□ -1.61
KRT40Q6A162 AL513174.1-201ENST00000423182 629 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 AC233728.2-201ENST00000425348 757 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 AL445669.1-201ENST00000426743 755 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.98□□□□□ -1.61
KRT40Q6A162 AC109583.1-201ENST00000432156 268 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 MTATP6P30-201ENST00000443540 664 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 RPL7L1P1-201ENST00000448259 785 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 PSPHP1-201ENST00000450062 261 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 RPL23AP15-201ENST00000450202 459 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 AL590365.1-201ENST00000450788 243 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.98□□□□□ -1.61
KRT40Q6A162 BTF3P5-201ENST00000457252 467 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 snoU109.1-201ENST00000459339 135 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 RPS26P28-201ENST00000470806 348 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.98□□□□□ -1.61
KRT40Q6A162 AC012170.1-201ENST00000495139 359 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRT40Q6A162 AC098799.2-201ENST00000509466 868 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 PTGES3P3-201ENST00000511479 482 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.98□□□□□ -1.61
KRT40Q6A162 MTND5P4-201ENST00000514978 288 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 OR4R3P-201ENST00000525084 838 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.98□□□□□ -1.61
KRT40Q6A162 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.98□□□□□ -1.61
KRT40Q6A162 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.98□□□□□ -1.61
KRT40Q6A162 MTND6P33-201ENST00000571794 183 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 AC017100.2-201ENST00000584628 355 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.98□□□□□ -1.61
KRT40Q6A162 AP000907.4-201ENST00000604143 237 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.98□□□□□ -1.61
KRT40Q6A162 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRT40Q6A162 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRT40Q6A162 LINC01355-201ENST00000566551 5444 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRT40Q6A162 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
KRT40Q6A162 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRT40Q6A162 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRT40Q6A162 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.97□□□□□ -1.61
KRT40Q6A162 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
KRT40Q6A162 HSPA8P17-201ENST00000427029 1382 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
KRT40Q6A162 Y_RNA.70-201ENST00000362886 110 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 RNU6-797P-201ENST00000363101 109 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 RNA5SP283-201ENST00000365604 119 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 RNU6-533P-201ENST00000384144 107 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 RNU6-809P-201ENST00000384461 107 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 FGF7P8-201ENST00000402994 292 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.97□□□□□ -1.61
KRT40Q6A162 C1DP2-201ENST00000418167 426 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 AC069157.1-201ENST00000421749 137 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 SDCBPP2-201ENST00000424643 885 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 ZNF863P-201ENST00000426746 417 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.97□□□□□ -1.61
KRT40Q6A162 AL512326.1-201ENST00000443050 721 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 GAPDHP17-201ENST00000449858 1001 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 RPL37P3-201ENST00000456825 293 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 RN7SL98P-201ENST00000462271 300 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 ACTR3P3-201ENST00000480448 893 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 AC104164.2-201ENST00000496953 495 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 AC019235.1-201ENST00000503847 207 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.97□□□□□ -1.61
KRT40Q6A162 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.97□□□□□ -1.61
KRT40Q6A162 POU5F1P7-201ENST00000508759 541 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 AC117522.1-201ENST00000509821 380 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 PPBPP1-201ENST00000510807 373 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 RNU6-347P-201ENST00000516658 105 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.97□□□□□ -1.61
KRT40Q6A162 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.97□□□□□ -1.61
KRT40Q6A162 AC068587.4-201ENST00000533893 186 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.97□□□□□ -1.61
KRT40Q6A162 AK6P1-201ENST00000540219 478 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.97□□□□□ -1.61
KRT40Q6A162 AC124068.1-201ENST00000563131 678 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.97□□□□□ -1.61
KRT40Q6A162 SNORD39.3-201ENST00000584451 71 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.97□□□□□ -1.61
KRT40Q6A162 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.97□□□□□ -1.61
KRT40Q6A162 AL356055.1-201ENST00000602528 446 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 AC010200.2-201ENST00000605098 235 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 AL353621.2-201ENST00000605340 133 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.97□□□□□ -1.61
KRT40Q6A162 AC243654.2-201ENST00000612843 443 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.97□□□□□ -1.61
KRT40Q6A162 MIR6863-201ENST00000636112 90 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.97□□□□□ -1.61
KRT40Q6A162 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
KRT40Q6A162 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KRT40Q6A162 AL592182.3-201ENST00000642132 3304 ntBASIC4.97□□□□□ -1.61
KRT40Q6A162 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.97□□□□□ -1.61
KRT40Q6A162 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KRT40Q6A162 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
KRT40Q6A162 AP002001.2-201ENST00000529025 1469 ntBASIC4.96□□□□□ -1.62
KRT40Q6A162 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms