Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC245517.5-201ENST00000611529 162 ntBASIC2.45□□□□□ -2.02
CCDC58Q4VC31 MIR7975-201ENST00000619350 68 ntBASIC2.45□□□□□ -2.02
CCDC58Q4VC31 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC58Q4VC31 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC58Q4VC31 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC58Q4VC31 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC58Q4VC31 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC58Q4VC31 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC58Q4VC31 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC58Q4VC31 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC58Q4VC31 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
CCDC58Q4VC31 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC58Q4VC31 Z82209.1-201ENST00000422141 2135 ntBASIC2.44□□□□□ -2.02
CCDC58Q4VC31 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC58Q4VC31 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC58Q4VC31 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC58Q4VC31 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC58Q4VC31 Y_RNA.625-201ENST00000411256 107 ntBASIC2.44□□□□□ -2.02
CCDC58Q4VC31 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC58Q4VC31 UBE2D3P2-201ENST00000424409 445 ntBASIC2.44□□□□□ -2.02
CCDC58Q4VC31 DUTP6-201ENST00000425573 462 ntBASIC2.44□□□□□ -2.02
CCDC58Q4VC31 RPL23AP74-201ENST00000437246 471 ntBASIC2.44□□□□□ -2.02
CCDC58Q4VC31 AL591503.2-201ENST00000442314 1005 ntBASIC2.44□□□□□ -2.02
CCDC58Q4VC31 AL671855.1-201ENST00000446875 1203 ntBASIC2.44□□□□□ -2.02
CCDC58Q4VC31 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC58Q4VC31 SYPL1P1-201ENST00000473622 768 ntBASIC2.44□□□□□ -2.02
CCDC58Q4VC31 AC126121.1-201ENST00000482313 553 ntBASIC2.44□□□□□ -2.02
CCDC58Q4VC31 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC58Q4VC31 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC58Q4VC31 DUXAP2-201ENST00000519198 589 ntBASIC2.44□□□□□ -2.02
CCDC58Q4VC31 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC58Q4VC31 H3F3AP1-201ENST00000559984 334 ntBASIC2.44□□□□□ -2.02
CCDC58Q4VC31 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.44□□□□□ -2.02
CCDC58Q4VC31 AC009303.3-201ENST00000591103 736 ntBASIC2.44□□□□□ -2.02
CCDC58Q4VC31 ELOCP35-201ENST00000604289 336 ntBASIC2.44□□□□□ -2.02
CCDC58Q4VC31 AC245389.1-201ENST00000605141 529 ntBASIC2.44□□□□□ -2.02
CCDC58Q4VC31 AC124312.4-201ENST00000605533 310 ntBASIC2.44□□□□□ -2.02
CCDC58Q4VC31 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC58Q4VC31 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC58Q4VC31 BX664608.1-201ENST00000610519 487 ntBASIC2.44□□□□□ -2.02
CCDC58Q4VC31 AC026422.1-201ENST00000623961 452 ntBASIC2.44□□□□□ -2.02
CCDC58Q4VC31 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.44□□□□□ -2.02
CCDC58Q4VC31 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CCDC58Q4VC31 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC58Q4VC31 AL359715.4-201ENST00000606629 1436 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 AC000403.1-201ENST00000613696 3585 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC58Q4VC31 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC58Q4VC31 MIR449B-201ENST00000384995 97 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 AL121972.1-201ENST00000402023 252 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 RNA5SP120-201ENST00000410900 112 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 AC007064.1-201ENST00000412238 351 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 AC092427.1-202ENST00000430569 476 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 RPS20P5-201ENST00000434808 360 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 Z77249.1-201ENST00000444622 1175 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC58Q4VC31 AC112492.1-201ENST00000449607 712 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.43□□□□□ -2.02
CCDC58Q4VC31 RPS4XP10-201ENST00000465034 731 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 RN7SL807P-201ENST00000470923 297 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 AC006445.1-201ENST00000491925 405 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 AC107222.1-201ENST00000510899 637 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 AC105914.1-201ENST00000511798 226 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 RNA5SP471-201ENST00000516971 106 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 IGLV3-17-201ENST00000519099 244 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.43□□□□□ -2.02
CCDC58Q4VC31 AC074029.1-201ENST00000552531 1044 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 PRELID2P1-201ENST00000552837 301 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC58Q4VC31 MIR5694-201ENST00000581190 76 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 AC090525.3-201ENST00000605601 189 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 AC084036.1-201ENST00000609190 508 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC58Q4VC31 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC58Q4VC31 MIR6810-201ENST00000622701 70 ntBASIC2.43□□□□□ -2.02
CCDC58Q4VC31 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC58Q4VC31 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
CCDC58Q4VC31 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC58Q4VC31 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC58Q4VC31 AL359693.1-201ENST00000614959 2407 ntBASIC2.42□□□□□ -2.02
CCDC58Q4VC31 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC58Q4VC31 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC58Q4VC31 RNU1-100P-201ENST00000365255 165 ntBASIC2.42□□□□□ -2.02
CCDC58Q4VC31 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CCDC58Q4VC31 AL158156.1-201ENST00000422509 473 ntBASIC2.42□□□□□ -2.02
CCDC58Q4VC31 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC58Q4VC31 MED6P1-201ENST00000439659 713 ntBASIC2.42□□□□□ -2.02
CCDC58Q4VC31 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC58Q4VC31 AC112653.1-201ENST00000443851 386 ntBASIC2.42□□□□□ -2.02
CCDC58Q4VC31 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC58Q4VC31 RPL37P4-201ENST00000448908 268 ntBASIC2.42□□□□□ -2.02
CCDC58Q4VC31 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.42□□□□□ -2.02
CCDC58Q4VC31 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC58Q4VC31 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC58Q4VC31 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC58Q4VC31 AC111000.5-201ENST00000506559 1178 ntBASIC2.42□□□□□ -2.02
CCDC58Q4VC31 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC58Q4VC31 SCGB1D5P-201ENST00000515134 247 ntBASIC2.42□□□□□ -2.02
CCDC58Q4VC31 SUB1P1-201ENST00000524415 382 ntBASIC2.42□□□□□ -2.02
CCDC58Q4VC31 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms