Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PCDH1Q08174 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH1Q08174 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PCDH1Q08174 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH1Q08174 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PCDH1Q08174 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
PCDH1Q08174 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PCDH1Q08174 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
PCDH1Q08174 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDH1Q08174 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH1Q08174 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDH1Q08174 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PCDH1Q08174 RNU6-960P-201ENST00000364056 120 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDH1Q08174 RNU6-1032P-201ENST00000384100 107 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 MT-TR-201ENST00000387439 65 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PCDH1Q08174 Y_RNA.618-201ENST00000410949 107 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 Y_RNA.646-201ENST00000410980 101 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 RN7SKP58-201ENST00000411010 305 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 AC009302.1-201ENST00000417147 390 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 AC018865.2-201ENST00000423631 129 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.39□□□□□ -1.55
PCDH1Q08174 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDH1Q08174 AC019185.1-201ENST00000442718 389 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 AC104058.1-201ENST00000448028 297 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDH1Q08174 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDH1Q08174 MTATP8P1-201ENST00000467115 207 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 RPL21P93-201ENST00000480465 489 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 RNU6-1092P-201ENST00000516955 87 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 RNU6-1213P-201ENST00000517075 94 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.39□□□□□ -1.55
PCDH1Q08174 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDH1Q08174 AP004609.2-201ENST00000532177 190 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDH1Q08174 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDH1Q08174 AC079600.1-201ENST00000550326 297 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDH1Q08174 AL049779.2-201ENST00000553847 315 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDH1Q08174 AC009852.2-201ENST00000567898 485 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 AL451044.1-201ENST00000604867 238 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDH1Q08174 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDH1Q08174 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDH1Q08174 DUSP12P1-201ENST00000612874 516 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 AL669831.3-213ENST00000636676 183 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH1Q08174 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH1Q08174 GVINP1-202ENST00000531871 7271 ntBASIC5.39□□□□□ -1.55
PCDH1Q08174 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH1Q08174 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH1Q08174 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
PCDH1Q08174 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
PCDH1Q08174 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH1Q08174 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH1Q08174 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH1Q08174 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDH1Q08174 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
PCDH1Q08174 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDH1Q08174 ZNF519P1-201ENST00000449011 1626 ntBASIC5.38□□□□□ -1.55
PCDH1Q08174 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDH1Q08174 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDH1Q08174 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.38□□□□□ -1.55
PCDH1Q08174 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDH1Q08174 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDH1Q08174 AC092681.1-201ENST00000297369 291 ntBASIC5.38□□□□□ -1.55
PCDH1Q08174 RNVU1-3-201ENST00000364313 161 ntBASIC5.38□□□□□ -1.55
PCDH1Q08174 RNU6-550P-201ENST00000391057 101 ntBASIC5.38□□□□□ -1.55
PCDH1Q08174 AL031985.1-201ENST00000392713 418 ntBASIC5.38□□□□□ -1.55
PCDH1Q08174 SOD2P1-201ENST00000396543 562 ntBASIC5.38□□□□□ -1.55
PCDH1Q08174 HMGB1P20-201ENST00000402555 677 ntBASIC5.38□□□□□ -1.55
PCDH1Q08174 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDH1Q08174 MIR1302-3-201ENST00000408128 138 ntBASIC5.38□□□□□ -1.55
PCDH1Q08174 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
PCDH1Q08174 RNU6-387P-201ENST00000411331 105 ntBASIC5.38□□□□□ -1.55
PCDH1Q08174 BMS1P17-202ENST00000416720 316 ntBASIC5.38□□□□□ -1.55
PCDH1Q08174 AC114482.1-201ENST00000418010 247 ntBASIC5.38□□□□□ -1.55
PCDH1Q08174 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDH1Q08174 ATG3P1-201ENST00000419507 911 ntBASIC5.38□□□□□ -1.55
PCDH1Q08174 RPS3P2-201ENST00000421346 701 ntBASIC5.38□□□□□ -1.55
PCDH1Q08174 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDH1Q08174 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDH1Q08174 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.38□□□□□ -1.55
PCDH1Q08174 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDH1Q08174 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDH1Q08174 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDH1Q08174 RNU6-764P-201ENST00000516396 105 ntBASIC5.38□□□□□ -1.55
PCDH1Q08174 IGLVIV-53-201ENST00000520107 367 ntBASIC5.38□□□□□ -1.55
PCDH1Q08174 NRBF2P4-201ENST00000520874 850 ntBASIC5.38□□□□□ -1.55
PCDH1Q08174 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDH1Q08174 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDH1Q08174 AC010653.1-201ENST00000571108 881 ntBASIC5.38□□□□□ -1.55
PCDH1Q08174 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PCDH1Q08174 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.38□□□□□ -1.55
PCDH1Q08174 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDH1Q08174 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDH1Q08174 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDH1Q08174 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms