Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC017037.2-201ENST00000513850 890 ntBASIC5.49□□□□□ -1.53
SOX4Q06945 RNU6-1038P-201ENST00000516516 104 ntBASIC5.49□□□□□ -1.53
SOX4Q06945 RNU6-566P-201ENST00000516790 107 ntBASIC5.49□□□□□ -1.53
SOX4Q06945 RN7SKP260-201ENST00000516907 149 ntBASIC5.49□□□□□ -1.53
SOX4Q06945 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.49□□□□□ -1.53
SOX4Q06945 RANP9-201ENST00000519957 271 ntBASIC5.49□□□□□ -1.53
SOX4Q06945 EIF4A2P5-201ENST00000529914 499 ntBASIC5.49□□□□□ -1.53
SOX4Q06945 AL118558.2-201ENST00000556294 238 ntBASIC5.49□□□□□ -1.53
SOX4Q06945 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX4Q06945 MIR4775-201ENST00000581168 75 ntBASIC5.49□□□□□ -1.53
SOX4Q06945 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.49□□□□□ -1.53
SOX4Q06945 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX4Q06945 AC022893.3-201ENST00000607665 437 ntBASIC5.49□□□□□ -1.53
SOX4Q06945 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX4Q06945 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX4Q06945 AP001784.1-201ENST00000624107 428 ntBASIC5.49□□□□□ -1.53
SOX4Q06945 OR52H1-202ENST00000641796 1061 ntBASIC5.49□□□□□ -1.53
SOX4Q06945 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX4Q06945 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX4Q06945 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX4Q06945 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX4Q06945 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SOX4Q06945 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SOX4Q06945 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX4Q06945 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
SOX4Q06945 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.49□□□□□ -1.53
SOX4Q06945 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX4Q06945 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX4Q06945 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SOX4Q06945 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX4Q06945 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX4Q06945 AC097714.1-201ENST00000511272 1647 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX4Q06945 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX4Q06945 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
SOX4Q06945 XPOTP1-201ENST00000443317 2398 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
SOX4Q06945 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX4Q06945 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 AL139276.1-201ENST00000311910 1001 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SOX4Q06945 RPL32P3-201ENST00000359025 275 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 OR1L6-202ENST00000373684 1044 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.48□□□□□ -1.53
SOX4Q06945 MIR558-201ENST00000384920 94 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SOX4Q06945 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX4Q06945 HMGB3P7-201ENST00000400214 611 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 RNU2-29P-201ENST00000410423 189 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 OR6C66P-201ENST00000414917 930 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 RPL31P45-201ENST00000419532 356 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 AL590233.1-201ENST00000430017 456 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 RPL36P19-201ENST00000430744 301 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.48□□□□□ -1.53
SOX4Q06945 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX4Q06945 FABP5P14-201ENST00000437273 393 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX4Q06945 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX4Q06945 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX4Q06945 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 IGHV5-78-201ENST00000450948 295 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX4Q06945 MTCO3P10-201ENST00000455912 772 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 AL583843.1-201ENST00000456070 346 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 AC010350.1-201ENST00000504908 231 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 MRPS33P2-201ENST00000507850 322 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX4Q06945 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.48□□□□□ -1.53
SOX4Q06945 RNU6-1271P-201ENST00000517049 105 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX4Q06945 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX4Q06945 AC008033.2-201ENST00000542626 177 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 AL161670.1-201ENST00000554348 137 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX4Q06945 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.48□□□□□ -1.53
SOX4Q06945 MIR4790-201ENST00000577799 79 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 AC053481.3-201ENST00000577881 843 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX4Q06945 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.48□□□□□ -1.53
SOX4Q06945 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.48□□□□□ -1.53
SOX4Q06945 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX4Q06945 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.48□□□□□ -1.53
SOX4Q06945 NUTF2P8-201ENST00000604593 363 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 AC243654.2-201ENST00000612843 443 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 AC091953.3-201ENST00000623220 236 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 Z69720.2-201ENST00000624755 279 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX4Q06945 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX4Q06945 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX4Q06945 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX4Q06945 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX4Q06945 HSPA8P14-201ENST00000552265 1805 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SOX4Q06945 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX4Q06945 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX4Q06945 DHX40P1-201ENST00000588725 1412 ntBASIC5.48□□□□□ -1.53
SOX4Q06945 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.48□□□□□ -1.53
SOX4Q06945 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX4Q06945 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.47□□□□□ -1.53
SOX4Q06945 AC090337.1-201ENST00000579651 2074 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms