Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.72□□□□□ -1.81
GABPAQ06546 AL449283.1-202ENST00000418249 604 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.72□□□□□ -1.81
GABPAQ06546 HMGB3P11-201ENST00000440127 604 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.72□□□□□ -1.81
GABPAQ06546 AC096571.1-202ENST00000506634 735 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 AC021146.1-201ENST00000511202 716 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.72□□□□□ -1.81
GABPAQ06546 RNU6-885P-201ENST00000516607 104 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 RNA5SP135-201ENST00000517019 125 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 SCARNA20.6-201ENST00000517251 106 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 AC091163.3-201ENST00000518269 1144 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 AC021451.1-201ENST00000523498 1129 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.72□□□□□ -1.81
GABPAQ06546 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.72□□□□□ -1.81
GABPAQ06546 AC091515.1-201ENST00000548110 679 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 EIF4BP1-201ENST00000554881 351 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.72□□□□□ -1.81
GABPAQ06546 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.72□□□□□ -1.81
GABPAQ06546 AC074051.3-201ENST00000570238 358 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 MIR5708-201ENST00000579723 85 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.72□□□□□ -1.81
GABPAQ06546 AL009028.1-201ENST00000604895 802 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.72□□□□□ -1.81
GABPAQ06546 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.72□□□□□ -1.81
GABPAQ06546 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
GABPAQ06546 AL391262.2-201ENST00000622466 494 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.72□□□□□ -1.81
GABPAQ06546 AC109454.4-201ENST00000623411 649 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 AC098679.5-201ENST00000624394 571 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 AC010608.3-201ENST00000625048 527 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.72□□□□□ -1.81
GABPAQ06546 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
GABPAQ06546 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.72□□□□□ -1.81
GABPAQ06546 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
GABPAQ06546 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.72□□□□□ -1.81
GABPAQ06546 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
GABPAQ06546 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
GABPAQ06546 AC011978.2-201ENST00000569835 2054 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
GABPAQ06546 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
GABPAQ06546 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
GABPAQ06546 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
GABPAQ06546 GNG5P1-201ENST00000255500 204 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 RNU6-582P-201ENST00000362989 107 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 RNU6-115P-201ENST00000364310 107 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.71□□□□□ -1.82
GABPAQ06546 SNORA44-201ENST00000384584 132 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 SNORD116-23-201ENST00000384645 92 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 RN7SKP220-201ENST00000410611 288 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 OR4K6P-201ENST00000416478 897 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.71□□□□□ -1.82
GABPAQ06546 Z77249.1-201ENST00000444622 1175 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 EXTL2P1-201ENST00000446218 416 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.71□□□□□ -1.82
GABPAQ06546 snoU109.3-201ENST00000459477 145 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
GABPAQ06546 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
GABPAQ06546 AC080014.1-201ENST00000496877 1201 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 AC068305.1-201ENST00000497406 726 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.71□□□□□ -1.82
GABPAQ06546 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.71□□□□□ -1.82
GABPAQ06546 ARL2BPP6-201ENST00000512757 439 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 DEFB130C-202ENST00000530001 230 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 OR4C2P-201ENST00000530855 1064 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 AL139174.1-201ENST00000531489 886 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 OR8L1P-201ENST00000534005 955 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.71□□□□□ -1.82
GABPAQ06546 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.71□□□□□ -1.82
GABPAQ06546 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.71□□□□□ -1.82
GABPAQ06546 AC009101.1-201ENST00000568135 242 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.71□□□□□ -1.82
GABPAQ06546 MIR4666A-201ENST00000580160 79 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 MIR4425-201ENST00000580572 84 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.71□□□□□ -1.82
GABPAQ06546 PRELID3BP8-201ENST00000604148 295 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 AC144521.1-201ENST00000607148 956 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.71□□□□□ -1.82
GABPAQ06546 AL592148.2-201ENST00000612210 372 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 AL162274.2-201ENST00000614406 332 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 MTND5P31-201ENST00000419366 1374 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 MTND4P10-201ENST00000446199 1363 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.71□□□□□ -1.82
GABPAQ06546 AC000367.1-201ENST00000452711 1766 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.71□□□□□ -1.82
GABPAQ06546 EXOC5P1-201ENST00000510543 1969 ntBASIC3.71□□□□□ -1.82
GABPAQ06546 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.7□□□□□ -1.82
GABPAQ06546 DCAF13P1-201ENST00000495256 1330 ntBASIC3.7□□□□□ -1.82
GABPAQ06546 HSPA8P1-201ENST00000425843 1833 ntBASIC3.7□□□□□ -1.82
GABPAQ06546 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GABPAQ06546 AC025125.1-201ENST00000624743 1922 ntBASIC3.7□□□□□ -1.82
GABPAQ06546 AL021368.2-201ENST00000606125 5352 ntBASIC3.7□□□□□ -1.82
GABPAQ06546 RNU6-839P-201ENST00000363347 108 ntBASIC3.7□□□□□ -1.82
GABPAQ06546 MTCO1P56-201ENST00000401674 224 ntBASIC3.7□□□□□ -1.82
GABPAQ06546 SSXP10-201ENST00000402595 565 ntBASIC3.7□□□□□ -1.82
GABPAQ06546 AL138885.1-201ENST00000405921 675 ntBASIC3.7□□□□□ -1.82
GABPAQ06546 AL139098.1-201ENST00000407291 389 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms