Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
RAE1P78406 RNU6-398P-201ENST00000384143 109 ntBASIC4.1□□□□□ -1.75
RAE1P78406 CYB5AP4-201ENST00000396692 399 ntBASIC4.1□□□□□ -1.75
RAE1P78406 SNORA11F-201ENST00000408237 128 ntBASIC4.1□□□□□ -1.75
RAE1P78406 RNU2-15P-201ENST00000410692 191 ntBASIC4.1□□□□□ -1.75
RAE1P78406 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RAE1P78406 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.1□□□□□ -1.75
RAE1P78406 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.1□□□□□ -1.75
RAE1P78406 AL353777.1-201ENST00000425552 326 ntBASIC4.1□□□□□ -1.75
RAE1P78406 LYPLA1P1-201ENST00000434514 622 ntBASIC4.1□□□□□ -1.75
RAE1P78406 RPL23AP52-201ENST00000439311 478 ntBASIC4.1□□□□□ -1.75
RAE1P78406 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.1□□□□□ -1.75
RAE1P78406 AC004924.1-201ENST00000480160 781 ntBASIC4.1□□□□□ -1.75
RAE1P78406 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.1□□□□□ -1.75
RAE1P78406 RN7SKP92-201ENST00000517266 244 ntBASIC4.1□□□□□ -1.75
RAE1P78406 IGLVIV-65-201ENST00000517313 360 ntBASIC4.1□□□□□ -1.75
RAE1P78406 AF186190.1-201ENST00000517470 480 ntBASIC4.1□□□□□ -1.75
RAE1P78406 MED28P5-201ENST00000528254 438 ntBASIC4.1□□□□□ -1.75
RAE1P78406 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.1□□□□□ -1.75
RAE1P78406 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RAE1P78406 AC006064.5-201ENST00000541782 248 ntBASIC4.1□□□□□ -1.75
RAE1P78406 PDCD5P1-201ENST00000543528 309 ntBASIC4.1□□□□□ -1.75
RAE1P78406 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.1□□□□□ -1.75
RAE1P78406 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.1□□□□□ -1.75
RAE1P78406 AC006960.3-201ENST00000561845 705 ntBASIC4.1□□□□□ -1.75
RAE1P78406 AC009101.1-201ENST00000568135 242 ntBASIC4.1□□□□□ -1.75
RAE1P78406 CYP4A43P-201ENST00000568156 121 ntBASIC4.1□□□□□ -1.75
RAE1P78406 NRBF2P1-201ENST00000587407 859 ntBASIC4.1□□□□□ -1.75
RAE1P78406 CKS1BP3-201ENST00000600888 237 ntBASIC4.1□□□□□ -1.75
RAE1P78406 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RAE1P78406 AC091304.9-201ENST00000612091 226 ntBASIC4.1□□□□□ -1.75
RAE1P78406 uc_338.13-201ENST00000618243 179 ntBASIC4.1□□□□□ -1.75
RAE1P78406 AC136475.10-201ENST00000620253 385 ntBASIC4.1□□□□□ -1.75
RAE1P78406 AC073534.2-201ENST00000620377 381 ntBASIC4.1□□□□□ -1.75
RAE1P78406 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.1□□□□□ -1.75
RAE1P78406 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.1□□□□□ -1.75
RAE1P78406 AC008013.2-202ENST00000637965 364 ntBASIC4.1□□□□□ -1.75
RAE1P78406 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.1□□□□□ -1.75
RAE1P78406 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RAE1P78406 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RAE1P78406 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RAE1P78406 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.1□□□□□ -1.75
RAE1P78406 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.1□□□□□ -1.75
RAE1P78406 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RAE1P78406 AC022893.2-201ENST00000564832 3296 ntBASIC4.1□□□□□ -1.75
RAE1P78406 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.09□□□□□ -1.75
RAE1P78406 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RAE1P78406 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.09□□□□□ -1.75
RAE1P78406 AL049555.1-201ENST00000562834 1933 ntBASIC4.09□□□□□ -1.75
RAE1P78406 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RAE1P78406 U8.3-201ENST00000363321 132 ntBASIC4.09□□□□□ -1.75
RAE1P78406 RNU6-359P-201ENST00000365466 108 ntBASIC4.09□□□□□ -1.75
RAE1P78406 RNU6-1207P-201ENST00000384343 107 ntBASIC4.09□□□□□ -1.75
RAE1P78406 AL359704.1-201ENST00000411586 781 ntBASIC4.09□□□□□ -1.75
RAE1P78406 AC119751.6-201ENST00000416712 186 ntBASIC4.09□□□□□ -1.75
RAE1P78406 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.09□□□□□ -1.75
RAE1P78406 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.09□□□□□ -1.75
RAE1P78406 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.09□□□□□ -1.75
RAE1P78406 AC108734.1-201ENST00000439549 399 ntBASIC4.09□□□□□ -1.75
RAE1P78406 RPL17P49-201ENST00000443728 411 ntBASIC4.09□□□□□ -1.75
RAE1P78406 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.09□□□□□ -1.75
RAE1P78406 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.09□□□□□ -1.75
RAE1P78406 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.09□□□□□ -1.75
RAE1P78406 RPS3AP17-201ENST00000472594 777 ntBASIC4.09□□□□□ -1.75
RAE1P78406 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.09□□□□□ -1.75
RAE1P78406 AC012170.1-201ENST00000495139 359 ntBASIC4.09□□□□□ -1.75
RAE1P78406 AK3P4-201ENST00000504283 583 ntBASIC4.09□□□□□ -1.75
RAE1P78406 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.09□□□□□ -1.75
RAE1P78406 AC006390.1-201ENST00000508068 283 ntBASIC4.09□□□□□ -1.75
RAE1P78406 AC011352.1-201ENST00000512300 793 ntBASIC4.09□□□□□ -1.75
RAE1P78406 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
RAE1P78406 AC022616.6-201ENST00000520479 119 ntBASIC4.09□□□□□ -1.75
RAE1P78406 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.09□□□□□ -1.75
RAE1P78406 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.09□□□□□ -1.75
RAE1P78406 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.09□□□□□ -1.75
RAE1P78406 TRAV8-5-201ENST00000537369 341 ntBASIC4.09□□□□□ -1.75
RAE1P78406 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.09□□□□□ -1.75
RAE1P78406 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.09□□□□□ -1.75
RAE1P78406 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.09□□□□□ -1.75
RAE1P78406 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.09□□□□□ -1.75
RAE1P78406 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.09□□□□□ -1.75
RAE1P78406 AC011468.4-201ENST00000603942 409 ntBASIC4.09□□□□□ -1.75
RAE1P78406 AC113403.1-201ENST00000604910 193 ntBASIC4.09□□□□□ -1.75
RAE1P78406 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.09□□□□□ -1.75
RAE1P78406 OR10AB1P-201ENST00000609613 938 ntBASIC4.09□□□□□ -1.75
RAE1P78406 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.09□□□□□ -1.75
RAE1P78406 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.09□□□□□ -1.75
RAE1P78406 AP000843.1-201ENST00000624880 701 ntBASIC4.09□□□□□ -1.75
RAE1P78406 OR5H6-203ENST00000642105 978 ntBASIC4.09□□□□□ -1.75
RAE1P78406 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RAE1P78406 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RAE1P78406 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RAE1P78406 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.08□□□□□ -1.76
RAE1P78406 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.08□□□□□ -1.76
RAE1P78406 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RAE1P78406 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.08□□□□□ -1.76
RAE1P78406 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RAE1P78406 GNG5P1-201ENST00000255500 204 ntBASIC4.08□□□□□ -1.76
RAE1P78406 RNU6-97P-201ENST00000363387 104 ntBASIC4.08□□□□□ -1.76
RAE1P78406 RNY4P34-201ENST00000364779 95 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms