Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SNORA7.2-201ENST00000364446 145 ntBASIC2.34□□□□□ -2.03
UBA52P62987 SNORA9.2-201ENST00000365361 133 ntBASIC2.34□□□□□ -2.03
UBA52P62987 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.34□□□□□ -2.03
UBA52P62987 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.34□□□□□ -2.03
UBA52P62987 BTF3P9-201ENST00000418784 283 ntBASIC2.34□□□□□ -2.03
UBA52P62987 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.34□□□□□ -2.03
UBA52P62987 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.34□□□□□ -2.03
UBA52P62987 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.34□□□□□ -2.03
UBA52P62987 AC129850.1-201ENST00000436203 508 ntBASIC2.34□□□□□ -2.03
UBA52P62987 CR769767.1-201ENST00000436337 346 ntBASIC2.34□□□□□ -2.03
UBA52P62987 CACYBPP1-201ENST00000438592 684 ntBASIC2.34□□□□□ -2.03
UBA52P62987 AL162389.1-201ENST00000449233 177 ntBASIC2.34□□□□□ -2.03
UBA52P62987 AC108938.1-201ENST00000451204 136 ntBASIC2.34□□□□□ -2.03
UBA52P62987 AIG1P1-201ENST00000503376 148 ntBASIC2.34□□□□□ -2.03
UBA52P62987 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.34□□□□□ -2.03
UBA52P62987 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.34□□□□□ -2.03
UBA52P62987 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.34□□□□□ -2.03
UBA52P62987 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.34□□□□□ -2.03
UBA52P62987 RNU6-711P-201ENST00000517255 106 ntBASIC2.34□□□□□ -2.03
UBA52P62987 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.34□□□□□ -2.03
UBA52P62987 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.34□□□□□ -2.03
UBA52P62987 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.34□□□□□ -2.03
UBA52P62987 DUXAP4-201ENST00000603046 613 ntBASIC2.34□□□□□ -2.03
UBA52P62987 AC024153.1-201ENST00000603103 365 ntBASIC2.34□□□□□ -2.03
UBA52P62987 AC136601.2-201ENST00000604356 474 ntBASIC2.34□□□□□ -2.03
UBA52P62987 AC005046.1-201ENST00000608515 625 ntBASIC2.34□□□□□ -2.03
UBA52P62987 AC010149.2-201ENST00000637608 315 ntBASIC2.34□□□□□ -2.03
UBA52P62987 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
UBA52P62987 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.33□□□□□ -2.04
UBA52P62987 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
UBA52P62987 RPS20P25-201ENST00000412447 352 ntBASIC2.33□□□□□ -2.04
UBA52P62987 EI24P1-201ENST00000416584 867 ntBASIC2.33□□□□□ -2.04
UBA52P62987 AL035407.1-201ENST00000429211 571 ntBASIC2.33□□□□□ -2.04
UBA52P62987 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.33□□□□□ -2.04
UBA52P62987 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.33□□□□□ -2.04
UBA52P62987 RPL21P131-201ENST00000497298 483 ntBASIC2.33□□□□□ -2.04
UBA52P62987 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.33□□□□□ -2.04
UBA52P62987 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.33□□□□□ -2.04
UBA52P62987 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.33□□□□□ -2.04
UBA52P62987 AC114781.4-201ENST00000513707 639 ntBASIC2.33□□□□□ -2.04
UBA52P62987 RNA5SP402-201ENST00000517148 110 ntBASIC2.33□□□□□ -2.04
UBA52P62987 RNU4-60P-201ENST00000517239 135 ntBASIC2.33□□□□□ -2.04
UBA52P62987 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.33□□□□□ -2.04
UBA52P62987 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.33□□□□□ -2.04
UBA52P62987 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.33□□□□□ -2.04
UBA52P62987 AC125611.2-201ENST00000551907 647 ntBASIC2.33□□□□□ -2.04
UBA52P62987 CYCSP39-201ENST00000565821 309 ntBASIC2.33□□□□□ -2.04
UBA52P62987 AC022079.2-201ENST00000619739 566 ntBASIC2.33□□□□□ -2.04
UBA52P62987 ZNF33CP-201ENST00000432492 2030 ntBASIC2.33□□□□□ -2.04
UBA52P62987 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
UBA52P62987 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.32□□□□□ -2.04
UBA52P62987 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
UBA52P62987 RNU6-356P-201ENST00000384140 107 ntBASIC2.32□□□□□ -2.04
UBA52P62987 MIR196B-201ENST00000384852 84 ntBASIC2.32□□□□□ -2.04
UBA52P62987 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.32□□□□□ -2.04
UBA52P62987 AC098592.2-201ENST00000413158 265 ntBASIC2.32□□□□□ -2.04
UBA52P62987 ATG3P1-201ENST00000419507 911 ntBASIC2.32□□□□□ -2.04
UBA52P62987 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.32□□□□□ -2.04
UBA52P62987 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.32□□□□□ -2.04
UBA52P62987 AC003982.1-202ENST00000469928 248 ntBASIC2.32□□□□□ -2.04
UBA52P62987 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
UBA52P62987 RPS27P27-201ENST00000498779 255 ntBASIC2.32□□□□□ -2.04
UBA52P62987 MTCYBP37-201ENST00000510642 1133 ntBASIC2.32□□□□□ -2.04
UBA52P62987 AC093755.1-201ENST00000512950 1023 ntBASIC2.32□□□□□ -2.04
UBA52P62987 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.32□□□□□ -2.04
UBA52P62987 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.32□□□□□ -2.04
UBA52P62987 PTP4A1P6-201ENST00000531034 478 ntBASIC2.32□□□□□ -2.04
UBA52P62987 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.32□□□□□ -2.04
UBA52P62987 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.32□□□□□ -2.04
UBA52P62987 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.32□□□□□ -2.04
UBA52P62987 AC090695.1-201ENST00000561269 1222 ntBASIC2.32□□□□□ -2.04
UBA52P62987 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.32□□□□□ -2.04
UBA52P62987 TPMTP1-201ENST00000592307 737 ntBASIC2.32□□□□□ -2.04
UBA52P62987 AC096947.1-201ENST00000603233 470 ntBASIC2.32□□□□□ -2.04
UBA52P62987 AC015871.2-201ENST00000603605 948 ntBASIC2.32□□□□□ -2.04
UBA52P62987 AL049779.4-201ENST00000604500 156 ntBASIC2.32□□□□□ -2.04
UBA52P62987 AC034236.3-201ENST00000605999 461 ntBASIC2.32□□□□□ -2.04
UBA52P62987 MIR6715A-201ENST00000615929 79 ntBASIC2.32□□□□□ -2.04
UBA52P62987 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.32□□□□□ -2.04
UBA52P62987 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
UBA52P62987 MTND5P3-201ENST00000438536 1800 ntBASIC2.32□□□□□ -2.04
UBA52P62987 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.32□□□□□ -2.04
UBA52P62987 AL512283.1-201ENST00000606756 1384 ntBASIC2.32□□□□□ -2.04
UBA52P62987 AC116096.1-201ENST00000566804 2314 ntBASIC2.31□□□□□ -2.04
UBA52P62987 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
UBA52P62987 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
UBA52P62987 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
UBA52P62987 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
UBA52P62987 MIR26A1-201ENST00000362205 77 ntBASIC2.31□□□□□ -2.04
UBA52P62987 AL353692.2-201ENST00000407054 335 ntBASIC2.31□□□□□ -2.04
UBA52P62987 RNA5SP508-201ENST00000411327 119 ntBASIC2.31□□□□□ -2.04
UBA52P62987 RPL7P8-201ENST00000411964 730 ntBASIC2.31□□□□□ -2.04
UBA52P62987 RPS6P14-201ENST00000425165 719 ntBASIC2.31□□□□□ -2.04
UBA52P62987 RPL23AP58-201ENST00000440453 469 ntBASIC2.31□□□□□ -2.04
UBA52P62987 EEF1B2P7-201ENST00000451177 676 ntBASIC2.31□□□□□ -2.04
UBA52P62987 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.31□□□□□ -2.04
UBA52P62987 NECAP1P2-201ENST00000455668 727 ntBASIC2.31□□□□□ -2.04
UBA52P62987 SNORD109B-201ENST00000458961 67 ntBASIC2.31□□□□□ -2.04
UBA52P62987 SNORD109A-201ENST00000459128 67 ntBASIC2.31□□□□□ -2.04
UBA52P62987 AC073901.1-201ENST00000462471 408 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms