Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 MTCO1P6-201ENST00000481192 1384 ntBASIC3.56□□□□□ -1.84
HMGCS2P54868 FAM35DP-201ENST00000323387 2712 ntBASIC3.56□□□□□ -1.84
HMGCS2P54868 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HMGCS2P54868 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HMGCS2P54868 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.56□□□□□ -1.84
HMGCS2P54868 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HMGCS2P54868 RNU6-77P-201ENST00000410554 91 ntBASIC3.56□□□□□ -1.84
HMGCS2P54868 RPS7P9-201ENST00000414704 586 ntBASIC3.56□□□□□ -1.84
HMGCS2P54868 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCS2P54868 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCS2P54868 AL135938.1-201ENST00000443141 297 ntBASIC3.56□□□□□ -1.84
HMGCS2P54868 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCS2P54868 MTND1P33-201ENST00000446251 917 ntBASIC3.56□□□□□ -1.84
HMGCS2P54868 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HMGCS2P54868 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCS2P54868 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCS2P54868 AC146507.1-201ENST00000468335 354 ntBASIC3.56□□□□□ -1.84
HMGCS2P54868 AC113420.1-201ENST00000507903 571 ntBASIC3.56□□□□□ -1.84
HMGCS2P54868 AC118465.1-201ENST00000513820 1271 ntBASIC3.56□□□□□ -1.84
HMGCS2P54868 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCS2P54868 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.56□□□□□ -1.84
HMGCS2P54868 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCS2P54868 AC124293.1-201ENST00000530034 493 ntBASIC3.56□□□□□ -1.84
HMGCS2P54868 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HMGCS2P54868 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.56□□□□□ -1.84
HMGCS2P54868 MTND1P8-201ENST00000571424 950 ntBASIC3.56□□□□□ -1.84
HMGCS2P54868 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCS2P54868 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCS2P54868 AL160237.3-201ENST00000604114 1013 ntBASIC3.56□□□□□ -1.84
HMGCS2P54868 AC073387.2-201ENST00000604797 784 ntBASIC3.56□□□□□ -1.84
HMGCS2P54868 AL365400.2-201ENST00000605604 902 ntBASIC3.56□□□□□ -1.84
HMGCS2P54868 VN1R7P-201ENST00000619242 903 ntBASIC3.56□□□□□ -1.84
HMGCS2P54868 AC092608.3-201ENST00000625017 386 ntBASIC3.56□□□□□ -1.84
HMGCS2P54868 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
HMGCS2P54868 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.56□□□□□ -1.84
HMGCS2P54868 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGCS2P54868 AC111188.2-201ENST00000529697 1387 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
HMGCS2P54868 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HMGCS2P54868 RNU6-549P-201ENST00000384433 107 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 RPL7P27-201ENST00000403775 720 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 RPL7P25-201ENST00000404151 721 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HMGCS2P54868 NUP35P2-201ENST00000416748 943 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 SFR1P2-201ENST00000421841 730 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.55□□□□□ -1.84
HMGCS2P54868 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.55□□□□□ -1.84
HMGCS2P54868 AL358794.1-201ENST00000445689 381 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGCS2P54868 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGCS2P54868 AP000873.1-201ENST00000463987 400 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 RPL37P6-202ENST00000464216 403 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGCS2P54868 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.55□□□□□ -1.84
HMGCS2P54868 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGCS2P54868 PCBP2P3-201ENST00000509726 843 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGCS2P54868 MTND2P32-201ENST00000521584 1038 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 IGJP1-201ENST00000522682 475 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 AC010306.1-201ENST00000523223 1117 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 AC104417.1-201ENST00000523974 751 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 NDUFS5P6-201ENST00000529136 295 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 RFPL1S-203ENST00000539579 330 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 AP005205.1-201ENST00000563503 508 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 MIR4509-3-201ENST00000578671 94 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.55□□□□□ -1.84
HMGCS2P54868 MIR4509-2-201ENST00000583920 94 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 VN1R88P-201ENST00000596787 292 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 AL390838.2-201ENST00000602394 274 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.55□□□□□ -1.84
HMGCS2P54868 AC121761.2-201ENST00000617300 689 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 MIR4509-1-201ENST00000618224 94 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 MIR4496-201ENST00000635896 61 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 AC138649.5-201ENST00000637456 137 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 AC017104.5-201ENST00000637647 639 ntBASIC3.55□□□□□ -1.84
HMGCS2P54868 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGCS2P54868 AC027287.1-201ENST00000553115 1453 ntBASIC3.54□□□□□ -1.84
HMGCS2P54868 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.54□□□□□ -1.84
HMGCS2P54868 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGCS2P54868 AL672296.1-201ENST00000427780 2158 ntBASIC3.54□□□□□ -1.84
HMGCS2P54868 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGCS2P54868 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HMGCS2P54868 MIR449A-201ENST00000362113 91 ntBASIC3.54□□□□□ -1.84
HMGCS2P54868 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
HMGCS2P54868 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGCS2P54868 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGCS2P54868 AMD1P2-201ENST00000412936 992 ntBASIC3.54□□□□□ -1.84
HMGCS2P54868 AL449283.1-202ENST00000418249 604 ntBASIC3.54□□□□□ -1.84
HMGCS2P54868 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGCS2P54868 C1DP1-201ENST00000426049 402 ntBASIC3.54□□□□□ -1.84
HMGCS2P54868 MTCYBP32-201ENST00000427945 1084 ntBASIC3.54□□□□□ -1.84
HMGCS2P54868 AC114973.1-201ENST00000429057 632 ntBASIC3.54□□□□□ -1.84
HMGCS2P54868 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.54□□□□□ -1.84
HMGCS2P54868 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGCS2P54868 AC117440.1-201ENST00000474107 571 ntBASIC3.54□□□□□ -1.84
HMGCS2P54868 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGCS2P54868 AC008837.1-201ENST00000511513 412 ntBASIC3.54□□□□□ -1.84
HMGCS2P54868 RNA5SP309-201ENST00000516670 106 ntBASIC3.54□□□□□ -1.84
HMGCS2P54868 RN7SKP283-201ENST00000517197 270 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms