Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RANP8-201ENST00000444720 713 ntBASIC3.68□□□□□ -1.82
PDX1P52945 AL133217.1-201ENST00000450980 425 ntBASIC3.68□□□□□ -1.82
PDX1P52945 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.68□□□□□ -1.82
PDX1P52945 AC026410.2-201ENST00000460281 156 ntBASIC3.68□□□□□ -1.82
PDX1P52945 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.68□□□□□ -1.82
PDX1P52945 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.68□□□□□ -1.82
PDX1P52945 RPL7P24-201ENST00000493052 752 ntBASIC3.68□□□□□ -1.82
PDX1P52945 OR5H5P-201ENST00000503164 928 ntBASIC3.68□□□□□ -1.82
PDX1P52945 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.68□□□□□ -1.82
PDX1P52945 AC093767.1-201ENST00000504523 156 ntBASIC3.68□□□□□ -1.82
PDX1P52945 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.68□□□□□ -1.82
PDX1P52945 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.68□□□□□ -1.82
PDX1P52945 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.68□□□□□ -1.82
PDX1P52945 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.68□□□□□ -1.82
PDX1P52945 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.68□□□□□ -1.82
PDX1P52945 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.68□□□□□ -1.82
PDX1P52945 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.68□□□□□ -1.82
PDX1P52945 DEFB131D-201ENST00000526803 184 ntBASIC3.68□□□□□ -1.82
PDX1P52945 OR8L1P-201ENST00000534005 955 ntBASIC3.68□□□□□ -1.82
PDX1P52945 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.68□□□□□ -1.82
PDX1P52945 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
PDX1P52945 AC008015.1-201ENST00000555505 465 ntBASIC3.68□□□□□ -1.82
PDX1P52945 MIR4999-201ENST00000585029 91 ntBASIC3.68□□□□□ -1.82
PDX1P52945 AL139286.1-201ENST00000604465 483 ntBASIC3.68□□□□□ -1.82
PDX1P52945 AC106791.2-201ENST00000604680 391 ntBASIC3.68□□□□□ -1.82
PDX1P52945 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.68□□□□□ -1.82
PDX1P52945 U3.45-201ENST00000607547 219 ntBASIC3.68□□□□□ -1.82
PDX1P52945 AC072039.2-201ENST00000608883 439 ntBASIC3.68□□□□□ -1.82
PDX1P52945 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.68□□□□□ -1.82
PDX1P52945 AC006065.5-201ENST00000623427 349 ntBASIC3.68□□□□□ -1.82
PDX1P52945 AL359715.5-201ENST00000623431 443 ntBASIC3.68□□□□□ -1.82
PDX1P52945 AC068057.2-201ENST00000624047 895 ntBASIC3.68□□□□□ -1.82
PDX1P52945 AC103706.2-201ENST00000638080 240 ntBASIC3.68□□□□□ -1.82
PDX1P52945 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDX1P52945 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PDX1P52945 MTCO1P23-201ENST00000415223 1526 ntBASIC3.68□□□□□ -1.82
PDX1P52945 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.68□□□□□ -1.82
PDX1P52945 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDX1P52945 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PDX1P52945 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.68□□□□□ -1.82
PDX1P52945 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.67□□□□□ -1.82
PDX1P52945 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PDX1P52945 PABPC1P7-201ENST00000413177 1513 ntBASIC3.67□□□□□ -1.82
PDX1P52945 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PDX1P52945 RNU6-525P-201ENST00000363685 104 ntBASIC3.67□□□□□ -1.82
PDX1P52945 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.67□□□□□ -1.82
PDX1P52945 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
PDX1P52945 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.67□□□□□ -1.82
PDX1P52945 RNU6-730P-201ENST00000383954 104 ntBASIC3.67□□□□□ -1.82
PDX1P52945 MIR483-201ENST00000385070 76 ntBASIC3.67□□□□□ -1.82
PDX1P52945 USP9YP33-201ENST00000412220 421 ntBASIC3.67□□□□□ -1.82
PDX1P52945 RAC1P3-201ENST00000416129 580 ntBASIC3.67□□□□□ -1.82
PDX1P52945 MTCYBP38-201ENST00000417160 1123 ntBASIC3.67□□□□□ -1.82
PDX1P52945 USP9YP26-201ENST00000421008 661 ntBASIC3.67□□□□□ -1.82
PDX1P52945 AC005517.2-201ENST00000424673 553 ntBASIC3.67□□□□□ -1.82
PDX1P52945 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.67□□□□□ -1.82
PDX1P52945 TXNL1P1-201ENST00000429528 554 ntBASIC3.67□□□□□ -1.82
PDX1P52945 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.67□□□□□ -1.82
PDX1P52945 CKS1BP5-201ENST00000434172 273 ntBASIC3.67□□□□□ -1.82
PDX1P52945 USP9YP35-201ENST00000435696 412 ntBASIC3.67□□□□□ -1.82
PDX1P52945 HMGB1P37-201ENST00000439613 609 ntBASIC3.67□□□□□ -1.82
PDX1P52945 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.67□□□□□ -1.82
PDX1P52945 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.67□□□□□ -1.82
PDX1P52945 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.67□□□□□ -1.82
PDX1P52945 RPS3AP12-201ENST00000443616 753 ntBASIC3.67□□□□□ -1.82
PDX1P52945 SETD6P1-201ENST00000444575 317 ntBASIC3.67□□□□□ -1.82
PDX1P52945 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.67□□□□□ -1.82
PDX1P52945 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.67□□□□□ -1.82
PDX1P52945 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.67□□□□□ -1.82
PDX1P52945 UBDP1-202ENST00000457888 382 ntBASIC3.67□□□□□ -1.82
PDX1P52945 RN7SL293P-201ENST00000481765 281 ntBASIC3.67□□□□□ -1.82
PDX1P52945 NCOR1P1-202ENST00000486162 291 ntBASIC3.67□□□□□ -1.82
PDX1P52945 AC069499.1-201ENST00000489433 509 ntBASIC3.67□□□□□ -1.82
PDX1P52945 PRELID3BP7-201ENST00000503606 469 ntBASIC3.67□□□□□ -1.82
PDX1P52945 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.67□□□□□ -1.82
PDX1P52945 SNORA74D-201ENST00000516404 141 ntBASIC3.67□□□□□ -1.82
PDX1P52945 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.67□□□□□ -1.82
PDX1P52945 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.67□□□□□ -1.82
PDX1P52945 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.67□□□□□ -1.82
PDX1P52945 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.67□□□□□ -1.82
PDX1P52945 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.67□□□□□ -1.82
PDX1P52945 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.67□□□□□ -1.82
PDX1P52945 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.67□□□□□ -1.82
PDX1P52945 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.67□□□□□ -1.82
PDX1P52945 AC002400.1-201ENST00000569310 726 ntBASIC3.67□□□□□ -1.82
PDX1P52945 MIR4637-201ENST00000582405 84 ntBASIC3.67□□□□□ -1.82
PDX1P52945 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.67□□□□□ -1.82
PDX1P52945 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.67□□□□□ -1.82
PDX1P52945 AC018714.1-201ENST00000605028 208 ntBASIC3.67□□□□□ -1.82
PDX1P52945 RNU1-30P-201ENST00000606575 163 ntBASIC3.67□□□□□ -1.82
PDX1P52945 AL159169.3-201ENST00000608871 561 ntBASIC3.67□□□□□ -1.82
PDX1P52945 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.67□□□□□ -1.82
PDX1P52945 IPO8P1-201ENST00000455509 3109 ntBASIC3.67□□□□□ -1.82
PDX1P52945 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PDX1P52945 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
PDX1P52945 BDP1P-201ENST00000582658 1990 ntBASIC3.67□□□□□ -1.82
PDX1P52945 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PDX1P52945 UBE3AP2-201ENST00000429033 2259 ntBASIC3.67□□□□□ -1.82
PDX1P52945 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
PDX1P52945 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms