Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 AC007991.1-201ENST00000522680 631 ntBASIC7.31□□□□□ -1.24
PRIM1P49642 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
PRIM1P49642 AC024224.1-201ENST00000538284 609 ntBASIC7.31□□□□□ -1.24
PRIM1P49642 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC7.31□□□□□ -1.24
PRIM1P49642 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC7.31□□□□□ -1.24
PRIM1P49642 AC006116.3-201ENST00000592968 361 ntBASIC7.31□□□□□ -1.24
PRIM1P49642 AL031320.1-201ENST00000604177 357 ntBASIC7.31□□□□□ -1.24
PRIM1P49642 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC7.31□□□□□ -1.24
PRIM1P49642 AC233263.6-201ENST00000631132 1963 ntBASIC7.31□□□□□ -1.24
PRIM1P49642 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PRIM1P49642 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.3□□□□□ -1.24
PRIM1P49642 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.3□□□□□ -1.24
PRIM1P49642 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRIM1P49642 RNA5-8SP7-201ENST00000363443 155 ntBASIC7.3□□□□□ -1.24
PRIM1P49642 SNORD14.1-201ENST00000365609 90 ntBASIC7.3□□□□□ -1.24
PRIM1P49642 Y_RNA.399-201ENST00000383955 105 ntBASIC7.3□□□□□ -1.24
PRIM1P49642 MIR130A-201ENST00000385274 89 ntBASIC7.3□□□□□ -1.24
PRIM1P49642 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC7.3□□□□□ -1.24
PRIM1P49642 AC108075.1-201ENST00000424692 529 ntBASIC7.3□□□□□ -1.24
PRIM1P49642 RPS15AP10-201ENST00000432472 382 ntBASIC7.3□□□□□ -1.24
PRIM1P49642 RPS17P8-201ENST00000434525 335 ntBASIC7.3□□□□□ -1.24
PRIM1P49642 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC7.3□□□□□ -1.24
PRIM1P49642 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC7.3□□□□□ -1.24
PRIM1P49642 RPL36AP13-201ENST00000457490 317 ntBASIC7.3□□□□□ -1.24
PRIM1P49642 SNORD5.1-201ENST00000458800 75 ntBASIC7.3□□□□□ -1.24
PRIM1P49642 AC011005.2-201ENST00000487324 359 ntBASIC7.3□□□□□ -1.24
PRIM1P49642 SNRPCP2-201ENST00000504370 475 ntBASIC7.3□□□□□ -1.24
PRIM1P49642 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC7.3□□□□□ -1.24
PRIM1P49642 IGLV3-24-201ENST00000517477 197 ntBASIC7.3□□□□□ -1.24
PRIM1P49642 RANP3-201ENST00000530970 276 ntBASIC7.3□□□□□ -1.24
PRIM1P49642 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC7.3□□□□□ -1.24
PRIM1P49642 MIR3128-201ENST00000581957 66 ntBASIC7.3□□□□□ -1.24
PRIM1P49642 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC7.3□□□□□ -1.24
PRIM1P49642 AC103858.2-201ENST00000621471 543 ntBASIC7.3□□□□□ -1.24
PRIM1P49642 MIR6810-201ENST00000622701 70 ntBASIC7.3□□□□□ -1.24
PRIM1P49642 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
PRIM1P49642 CPS1-IT1-201ENST00000628368 2306 ntBASIC7.3□□□□□ -1.24
PRIM1P49642 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRIM1P49642 AL731566.1-201ENST00000620490 1937 ntBASIC7.3□□□□□ -1.24
PRIM1P49642 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRIM1P49642 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRIM1P49642 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRIM1P49642 AL359955.1-201ENST00000455242 3275 ntBASIC7.3□□□□□ -1.24
PRIM1P49642 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
PRIM1P49642 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
PRIM1P49642 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
PRIM1P49642 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PRIM1P49642 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PRIM1P49642 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.29□□□□□ -1.24
PRIM1P49642 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
PRIM1P49642 Y_RNA.14-201ENST00000362415 103 ntBASIC7.29□□□□□ -1.24
PRIM1P49642 RNU1-43P-201ENST00000365052 165 ntBASIC7.29□□□□□ -1.24
PRIM1P49642 RNU5E-6P-201ENST00000365574 115 ntBASIC7.29□□□□□ -1.24
PRIM1P49642 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7.29□□□□□ -1.24
PRIM1P49642 AL137014.1-201ENST00000420490 1226 ntBASIC7.29□□□□□ -1.24
PRIM1P49642 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC7.29□□□□□ -1.24
PRIM1P49642 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.29□□□□□ -1.24
PRIM1P49642 RPS15AP27-201ENST00000449183 343 ntBASIC7.29□□□□□ -1.24
PRIM1P49642 AC073850.1-201ENST00000449243 255 ntBASIC7.29□□□□□ -1.24
PRIM1P49642 AL389915.2-201ENST00000454576 441 ntBASIC7.29□□□□□ -1.24
PRIM1P49642 AC005008.1-201ENST00000456151 612 ntBASIC7.29□□□□□ -1.24
PRIM1P49642 SNORD121B-201ENST00000458838 81 ntBASIC7.29□□□□□ -1.24
PRIM1P49642 AL035690.1-201ENST00000490892 383 ntBASIC7.29□□□□□ -1.24
PRIM1P49642 DUTP1-201ENST00000493631 470 ntBASIC7.29□□□□□ -1.24
PRIM1P49642 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC7.29□□□□□ -1.24
PRIM1P49642 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC7.29□□□□□ -1.24
PRIM1P49642 AC105384.2-201ENST00000508433 640 ntBASIC7.29□□□□□ -1.24
PRIM1P49642 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PRIM1P49642 FAM60DP-201ENST00000524174 632 ntBASIC7.29□□□□□ -1.24
PRIM1P49642 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC7.29□□□□□ -1.24
PRIM1P49642 APAF1-207ENST00000547743 651 ntTSL 3 BASIC7.29□□□□□ -1.24
PRIM1P49642 AC024619.4-201ENST00000580924 316 ntBASIC7.29□□□□□ -1.24
PRIM1P49642 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.29□□□□□ -1.24
PRIM1P49642 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PRIM1P49642 AL355816.1-201ENST00000607951 118 ntBASIC7.29□□□□□ -1.24
PRIM1P49642 AC025574.2-201ENST00000615621 514 ntBASIC7.29□□□□□ -1.24
PRIM1P49642 AP002799.1-201ENST00000623552 423 ntBASIC7.29□□□□□ -1.24
PRIM1P49642 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PRIM1P49642 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.29□□□□□ -1.24
PRIM1P49642 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PRIM1P49642 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PRIM1P49642 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
PRIM1P49642 MSL3P1-202ENST00000440028 1468 ntBASIC7.29□□□□□ -1.24
PRIM1P49642 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC7.29□□□□□ -1.24
PRIM1P49642 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PRIM1P49642 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PRIM1P49642 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PRIM1P49642 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.29□□□□□ -1.24
PRIM1P49642 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PRIM1P49642 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PRIM1P49642 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
PRIM1P49642 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PRIM1P49642 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PRIM1P49642 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
PRIM1P49642 SNORA16A-201ENST00000384342 137 ntBASIC7.28□□□□□ -1.24
PRIM1P49642 SNORA24.1-201ENST00000384401 135 ntBASIC7.28□□□□□ -1.24
PRIM1P49642 Y_RNA.562-201ENST00000384695 113 ntBASIC7.28□□□□□ -1.24
PRIM1P49642 RNU6-550P-201ENST00000391057 101 ntBASIC7.28□□□□□ -1.24
PRIM1P49642 RPL21P1-201ENST00000399532 476 ntBASIC7.28□□□□□ -1.24
PRIM1P49642 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms