Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SNORA51.6-201ENST00000384151 125 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 RNU6-610P-201ENST00000384264 107 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 RNU1-101P-201ENST00000391171 127 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CX3CR1P49238 AL136133.1-201ENST00000413694 376 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 RPS29P4-201ENST00000414733 161 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.9□□□□□ -1.95
CX3CR1P49238 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.9□□□□□ -1.95
CX3CR1P49238 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CX3CR1P49238 UBE2V1P6-201ENST00000430840 422 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 AP000949.1-201ENST00000438328 629 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CX3CR1P49238 MTND2P19-201ENST00000449129 1012 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.9□□□□□ -1.95
CX3CR1P49238 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.9□□□□□ -1.95
CX3CR1P49238 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.9□□□□□ -1.95
CX3CR1P49238 PTGES3P5-201ENST00000455109 434 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.9□□□□□ -1.95
CX3CR1P49238 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.9□□□□□ -1.95
CX3CR1P49238 RN7SL542P-201ENST00000467147 294 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 RPL21P18-201ENST00000469899 480 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.9□□□□□ -1.95
CX3CR1P49238 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.9□□□□□ -1.95
CX3CR1P49238 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 MTCO2P9-201ENST00000503214 694 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.9□□□□□ -1.95
CX3CR1P49238 MTND4LP22-201ENST00000508209 276 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 RNU6-467P-201ENST00000517027 110 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 AC023632.4-201ENST00000517783 191 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 AC026403.1-201ENST00000518938 295 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 AC022690.1-201ENST00000526681 550 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 OR8I1P-201ENST00000529291 931 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 OR5B10P-201ENST00000532869 642 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.9□□□□□ -1.95
CX3CR1P49238 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.9□□□□□ -1.95
CX3CR1P49238 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.9□□□□□ -1.95
CX3CR1P49238 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
CX3CR1P49238 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.9□□□□□ -1.95
CX3CR1P49238 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.9□□□□□ -1.95
CX3CR1P49238 SNORA51-201ENST00000606420 132 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 uc_338.1-201ENST00000612113 180 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 AC015967.1-201ENST00000619893 476 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 AC039056.2-201ENST00000622261 511 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.9□□□□□ -1.95
CX3CR1P49238 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.9□□□□□ -1.95
CX3CR1P49238 SRP72P2-201ENST00000344851 1979 ntBASIC2.9□□□□□ -1.95
CX3CR1P49238 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CX3CR1P49238 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CX3CR1P49238 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
CX3CR1P49238 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CX3CR1P49238 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.89□□□□□ -1.95
CX3CR1P49238 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CX3CR1P49238 AC025750.1-201ENST00000399891 379 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 AL024474.1-201ENST00000404655 591 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 RNA5SP44-201ENST00000410446 133 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 AC007899.1-201ENST00000412776 775 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 AC099677.1-201ENST00000420575 175 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 NIPA2P1-201ENST00000426223 976 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.89□□□□□ -1.95
CX3CR1P49238 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.89□□□□□ -1.95
CX3CR1P49238 AL512637.2-201ENST00000431287 1256 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 TRIM60P18-201ENST00000441518 828 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.89□□□□□ -1.95
CX3CR1P49238 Z99127.3-201ENST00000448158 395 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 RPL26P28-201ENST00000451325 435 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.89□□□□□ -1.95
CX3CR1P49238 RPL23AP31-201ENST00000456160 467 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 AC015908.1-201ENST00000478739 476 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.89□□□□□ -1.95
CX3CR1P49238 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.89□□□□□ -1.95
CX3CR1P49238 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.89□□□□□ -1.95
CX3CR1P49238 AC091860.1-201ENST00000505723 432 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CX3CR1P49238 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.89□□□□□ -1.95
CX3CR1P49238 HMGN1P15-201ENST00000513870 295 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 RNU6-27P-201ENST00000516146 107 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 RNU6-711P-201ENST00000517255 106 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 AC113192.3-201ENST00000529152 742 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.89□□□□□ -1.95
CX3CR1P49238 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CX3CR1P49238 AC018630.1-201ENST00000541376 925 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 EEF1B2P4-201ENST00000551398 348 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.89□□□□□ -1.95
CX3CR1P49238 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.89□□□□□ -1.95
CX3CR1P49238 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CX3CR1P49238 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.89□□□□□ -1.95
CX3CR1P49238 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.89□□□□□ -1.95
CX3CR1P49238 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.89□□□□□ -1.95
CX3CR1P49238 SNORD84-203ENST00000584275 78 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 AC055876.5-201ENST00000605667 259 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 AC016877.3-201ENST00000606778 504 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 AC092574.1-201ENST00000609771 420 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 AP005229.2-201ENST00000609980 697 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.89□□□□□ -1.95
CX3CR1P49238 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CX3CR1P49238 AC008083.4-201ENST00000615076 444 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.89□□□□□ -1.95
CX3CR1P49238 AC091925.2-201ENST00000625059 256 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 AC090897.3-201ENST00000636973 1157 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms