Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC004383.1-201ENST00000438135 289 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 AC093156.1-201ENST00000440382 670 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 RPS7P5-201ENST00000441482 581 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 AC073909.1-201ENST00000447112 999 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.59□□□□□ -1.51
CHRNA4P43681 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.59□□□□□ -1.51
CHRNA4P43681 RPS29P26-201ENST00000477483 171 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.59□□□□□ -1.51
CHRNA4P43681 TXNP6-201ENST00000510190 310 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 RFPL4AP3-201ENST00000515267 345 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 SCARNA16.2-201ENST00000516520 172 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 RNA5SP503-201ENST00000517047 117 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.59□□□□□ -1.51
CHRNA4P43681 AC112191.2-201ENST00000522428 333 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.59□□□□□ -1.51
CHRNA4P43681 AP003497.1-201ENST00000528472 562 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.59□□□□□ -1.51
CHRNA4P43681 LSM3P2-201ENST00000551246 273 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 AC025884.1-201ENST00000556034 378 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.59□□□□□ -1.51
CHRNA4P43681 AC018552.3-201ENST00000567416 561 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.59□□□□□ -1.51
CHRNA4P43681 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA4P43681 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.59□□□□□ -1.51
CHRNA4P43681 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA4P43681 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
CHRNA4P43681 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.59□□□□□ -1.51
CHRNA4P43681 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA4P43681 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA4P43681 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA4P43681 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA4P43681 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA4P43681 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CHRNA4P43681 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA4P43681 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA4P43681 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.58□□□□□ -1.52
CHRNA4P43681 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA4P43681 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA4P43681 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA4P43681 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.58□□□□□ -1.52
CHRNA4P43681 RNU6-1151P-201ENST00000384684 107 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 MIR558-201ENST00000384920 94 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 RNU2-51P-201ENST00000410708 197 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 MRPS18CP6-201ENST00000423587 223 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.58□□□□□ -1.52
CHRNA4P43681 BX276092.6-201ENST00000430476 250 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 MYL8P-204ENST00000431574 518 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.58□□□□□ -1.52
CHRNA4P43681 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.58□□□□□ -1.52
CHRNA4P43681 AP000281.1-201ENST00000444036 316 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 NDUFB1P2-201ENST00000449477 176 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 NANOGP10-201ENST00000453325 895 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.58□□□□□ -1.52
CHRNA4P43681 BX276092.8-201ENST00000455722 250 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 RPL21P71-201ENST00000465598 459 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 TRBVB-201ENST00000477100 408 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.58□□□□□ -1.52
CHRNA4P43681 RPL23AP72-201ENST00000492447 435 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA4P43681 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.58□□□□□ -1.52
CHRNA4P43681 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.58□□□□□ -1.52
CHRNA4P43681 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.58□□□□□ -1.52
CHRNA4P43681 AC040926.1-201ENST00000530195 238 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.58□□□□□ -1.52
CHRNA4P43681 AL049839.1-201ENST00000556151 657 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 AL049872.1-201ENST00000556323 322 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 AP005403.1-201ENST00000579720 229 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 MIR3614-201ENST00000581261 86 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 SS18L2P2-201ENST00000583960 235 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.58□□□□□ -1.52
CHRNA4P43681 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.58□□□□□ -1.52
CHRNA4P43681 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.58□□□□□ -1.52
CHRNA4P43681 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.58□□□□□ -1.52
CHRNA4P43681 RN7SL787P-201ENST00000613000 284 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 AL138825.1-201ENST00000618587 192 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 AC140134.1-201ENST00000511830 3544 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA4P43681 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
CHRNA4P43681 PABPC1P7-201ENST00000413177 1513 ntBASIC5.58□□□□□ -1.52
CHRNA4P43681 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA4P43681 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.58□□□□□ -1.52
CHRNA4P43681 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
CHRNA4P43681 AL353796.1-201ENST00000561542 3241 ntBASIC5.57□□□□□ -1.52
CHRNA4P43681 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CHRNA4P43681 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CHRNA4P43681 AC011978.2-201ENST00000569835 2054 ntBASIC5.57□□□□□ -1.52
CHRNA4P43681 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CHRNA4P43681 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CHRNA4P43681 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.57□□□□□ -1.52
CHRNA4P43681 AL360270.2-201ENST00000562952 5985 ntBASIC5.57□□□□□ -1.52
CHRNA4P43681 PROS2P-201ENST00000474651 1951 ntBASIC5.57□□□□□ -1.52
CHRNA4P43681 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CHRNA4P43681 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CHRNA4P43681 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CHRNA4P43681 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CHRNA4P43681 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CHRNA4P43681 RN7SKP145-201ENST00000363291 303 ntBASIC5.57□□□□□ -1.52
CHRNA4P43681 SNORA70.6-201ENST00000383934 134 ntBASIC5.57□□□□□ -1.52
CHRNA4P43681 SNORA16A-201ENST00000384342 137 ntBASIC5.57□□□□□ -1.52
CHRNA4P43681 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms