Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SSR1P43307 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.43□□□□□ -1.86
SSR1P43307 AC245052.5-201ENST00000416320 649 ntBASIC3.43□□□□□ -1.86
SSR1P43307 MTCO2P1-201ENST00000424648 477 ntBASIC3.43□□□□□ -1.86
SSR1P43307 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.43□□□□□ -1.86
SSR1P43307 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.43□□□□□ -1.86
SSR1P43307 AC122718.1-201ENST00000439448 744 ntBASIC3.43□□□□□ -1.86
SSR1P43307 Z99127.3-201ENST00000448158 395 ntBASIC3.43□□□□□ -1.86
SSR1P43307 AL353718.1-201ENST00000451028 517 ntBASIC3.43□□□□□ -1.86
SSR1P43307 BX248409.1-201ENST00000455497 255 ntBASIC3.43□□□□□ -1.86
SSR1P43307 FAM133DP-201ENST00000464802 691 ntBASIC3.43□□□□□ -1.86
SSR1P43307 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SSR1P43307 DSTNP2-201ENST00000504533 515 ntBASIC3.43□□□□□ -1.86
SSR1P43307 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SSR1P43307 SAP18P1-201ENST00000512058 390 ntBASIC3.43□□□□□ -1.86
SSR1P43307 AC104027.1-201ENST00000521887 300 ntBASIC3.43□□□□□ -1.86
SSR1P43307 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.43□□□□□ -1.86
SSR1P43307 AC007458.1-201ENST00000542812 373 ntBASIC3.43□□□□□ -1.86
SSR1P43307 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.43□□□□□ -1.86
SSR1P43307 CR383656.14-201ENST00000551951 406 ntBASIC3.43□□□□□ -1.86
SSR1P43307 AC011611.1-201ENST00000552179 197 ntBASIC3.43□□□□□ -1.86
SSR1P43307 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.43□□□□□ -1.86
SSR1P43307 AC095057.3-201ENST00000567102 1157 ntBASIC3.43□□□□□ -1.86
SSR1P43307 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.43□□□□□ -1.86
SSR1P43307 MTCO3P13-201ENST00000577757 781 ntBASIC3.43□□□□□ -1.86
SSR1P43307 AC138761.3-201ENST00000579993 334 ntBASIC3.43□□□□□ -1.86
SSR1P43307 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.43□□□□□ -1.86
SSR1P43307 AL031985.2-201ENST00000600955 480 ntBASIC3.43□□□□□ -1.86
SSR1P43307 AC007566.2-201ENST00000603642 413 ntBASIC3.43□□□□□ -1.86
SSR1P43307 AL133507.1-201ENST00000605269 557 ntBASIC3.43□□□□□ -1.86
SSR1P43307 AL109618.2-201ENST00000605527 211 ntBASIC3.43□□□□□ -1.86
SSR1P43307 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.43□□□□□ -1.86
SSR1P43307 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.43□□□□□ -1.86
SSR1P43307 AC069234.5-201ENST00000611056 416 ntBASIC3.43□□□□□ -1.86
SSR1P43307 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.43□□□□□ -1.86
SSR1P43307 AC007275.1-201ENST00000621243 671 ntBASIC3.43□□□□□ -1.86
SSR1P43307 AC097460.3-201ENST00000623099 442 ntBASIC3.43□□□□□ -1.86
SSR1P43307 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SSR1P43307 AC138915.1-201ENST00000565427 1685 ntBASIC3.43□□□□□ -1.86
SSR1P43307 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.42□□□□□ -1.86
SSR1P43307 AC009487.2-201ENST00000420969 6821 ntBASIC3.42□□□□□ -1.86
SSR1P43307 U3.11-201ENST00000364476 212 ntBASIC3.42□□□□□ -1.86
SSR1P43307 RPL21P3-201ENST00000395517 478 ntBASIC3.42□□□□□ -1.86
SSR1P43307 RN7SKP111-201ENST00000410349 271 ntBASIC3.42□□□□□ -1.86
SSR1P43307 RNA5SP38-201ENST00000410750 119 ntBASIC3.42□□□□□ -1.86
SSR1P43307 RPL32P35-201ENST00000415214 394 ntBASIC3.42□□□□□ -1.86
SSR1P43307 AC006960.1-201ENST00000419980 153 ntBASIC3.42□□□□□ -1.86
SSR1P43307 AL009174.1-201ENST00000426577 416 ntBASIC3.42□□□□□ -1.86
SSR1P43307 RPL21P133-201ENST00000443666 476 ntBASIC3.42□□□□□ -1.86
SSR1P43307 RPS26P56-201ENST00000444468 240 ntBASIC3.42□□□□□ -1.86
SSR1P43307 CDC27P1-201ENST00000445384 715 ntBASIC3.42□□□□□ -1.86
SSR1P43307 AL096803.2-201ENST00000450032 677 ntBASIC3.42□□□□□ -1.86
SSR1P43307 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.42□□□□□ -1.86
SSR1P43307 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.42□□□□□ -1.86
SSR1P43307 RPS4XP6-201ENST00000477670 797 ntBASIC3.42□□□□□ -1.86
SSR1P43307 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.42□□□□□ -1.86
SSR1P43307 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.42□□□□□ -1.86
SSR1P43307 AC021678.1-201ENST00000505195 936 ntBASIC3.42□□□□□ -1.86
SSR1P43307 AC118282.1-201ENST00000506408 765 ntBASIC3.42□□□□□ -1.86
SSR1P43307 AC109471.1-201ENST00000511631 612 ntBASIC3.42□□□□□ -1.86
SSR1P43307 AC119751.1-201ENST00000513357 765 ntBASIC3.42□□□□□ -1.86
SSR1P43307 SNORA31.20-201ENST00000517111 133 ntBASIC3.42□□□□□ -1.86
SSR1P43307 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.42□□□□□ -1.86
SSR1P43307 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.42□□□□□ -1.86
SSR1P43307 HIGD1AP6-201ENST00000521833 279 ntBASIC3.42□□□□□ -1.86
SSR1P43307 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.42□□□□□ -1.86
SSR1P43307 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.42□□□□□ -1.86
SSR1P43307 AC055876.1-202ENST00000567053 138 ntBASIC3.42□□□□□ -1.86
SSR1P43307 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.42□□□□□ -1.86
SSR1P43307 AC098483.2-201ENST00000603158 454 ntBASIC3.42□□□□□ -1.86
SSR1P43307 AC107871.2-201ENST00000612894 502 ntBASIC3.42□□□□□ -1.86
SSR1P43307 AL157817.1-201ENST00000614264 790 ntBASIC3.42□□□□□ -1.86
SSR1P43307 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.42□□□□□ -1.86
SSR1P43307 AL355365.1-201ENST00000616480 294 ntBASIC3.42□□□□□ -1.86
SSR1P43307 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SSR1P43307 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.42□□□□□ -1.86
SSR1P43307 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.42□□□□□ -1.86
SSR1P43307 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
SSR1P43307 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
SSR1P43307 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SSR1P43307 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
SSR1P43307 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSR1P43307 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SSR1P43307 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SSR1P43307 AL353743.1-202ENST00000431724 1695 ntBASIC3.41□□□□□ -1.86
SSR1P43307 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SSR1P43307 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SSR1P43307 SNORA51.12-201ENST00000384448 134 ntBASIC3.41□□□□□ -1.86
SSR1P43307 MIR490-201ENST00000384865 128 ntBASIC3.41□□□□□ -1.86
SSR1P43307 AL096701.2-201ENST00000416920 238 ntBASIC3.41□□□□□ -1.86
SSR1P43307 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.41□□□□□ -1.86
SSR1P43307 AL390023.1-201ENST00000428836 262 ntBASIC3.41□□□□□ -1.86
SSR1P43307 UBE2V1P6-201ENST00000430840 422 ntBASIC3.41□□□□□ -1.86
SSR1P43307 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.41□□□□□ -1.86
SSR1P43307 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.41□□□□□ -1.86
SSR1P43307 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.41□□□□□ -1.86
SSR1P43307 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.41□□□□□ -1.86
SSR1P43307 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.41□□□□□ -1.86
SSR1P43307 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.41□□□□□ -1.86
SSR1P43307 COL6A4P2-205ENST00000509855 506 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms