Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MED28P5-201ENST00000528254 438 ntBASIC3.99□□□□□ -1.77
HADHAP40939 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.99□□□□□ -1.77
HADHAP40939 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.99□□□□□ -1.77
HADHAP40939 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.99□□□□□ -1.77
HADHAP40939 VN1R92P-201ENST00000598511 928 ntBASIC3.99□□□□□ -1.77
HADHAP40939 AL596327.1-201ENST00000603629 213 ntBASIC3.99□□□□□ -1.77
HADHAP40939 RNU6-88P-201ENST00000606801 100 ntBASIC3.99□□□□□ -1.77
HADHAP40939 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.99□□□□□ -1.77
HADHAP40939 AL590282.1-201ENST00000610379 1136 ntBASIC3.99□□□□□ -1.77
HADHAP40939 AL136981.2-201ENST00000617319 734 ntBASIC3.99□□□□□ -1.77
HADHAP40939 AL445264.1-201ENST00000621719 171 ntBASIC3.99□□□□□ -1.77
HADHAP40939 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.99□□□□□ -1.77
HADHAP40939 AC010733.2-201ENST00000589496 5702 ntBASIC3.99□□□□□ -1.77
HADHAP40939 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
HADHAP40939 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.99□□□□□ -1.77
HADHAP40939 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HADHAP40939 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HADHAP40939 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
HADHAP40939 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HADHAP40939 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
HADHAP40939 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
HADHAP40939 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.98□□□□□ -1.77
HADHAP40939 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HADHAP40939 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
HADHAP40939 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
HADHAP40939 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HADHAP40939 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HADHAP40939 SNORA4.1-201ENST00000364263 144 ntBASIC3.98□□□□□ -1.77
HADHAP40939 TAS2R15P-201ENST00000390674 928 ntBASIC3.98□□□□□ -1.77
HADHAP40939 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.98□□□□□ -1.77
HADHAP40939 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HADHAP40939 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.98□□□□□ -1.77
HADHAP40939 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.98□□□□□ -1.77
HADHAP40939 AC010099.3-201ENST00000423896 409 ntBASIC3.98□□□□□ -1.77
HADHAP40939 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HADHAP40939 AL691449.1-201ENST00000426570 421 ntBASIC3.98□□□□□ -1.77
HADHAP40939 VDAC1P3-201ENST00000434069 851 ntBASIC3.98□□□□□ -1.77
HADHAP40939 MTND4LP10-201ENST00000435146 291 ntBASIC3.98□□□□□ -1.77
HADHAP40939 AC083863.1-201ENST00000438811 231 ntBASIC3.98□□□□□ -1.77
HADHAP40939 MTCYBP34-201ENST00000439552 670 ntBASIC3.98□□□□□ -1.77
HADHAP40939 SDCBPP1-201ENST00000440192 890 ntBASIC3.98□□□□□ -1.77
HADHAP40939 AC005297.2-201ENST00000450430 606 ntBASIC3.98□□□□□ -1.77
HADHAP40939 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.98□□□□□ -1.77
HADHAP40939 DNAJC19P1-201ENST00000455312 319 ntBASIC3.98□□□□□ -1.77
HADHAP40939 snoU13.24-201ENST00000458998 104 ntBASIC3.98□□□□□ -1.77
HADHAP40939 AC078785.3-201ENST00000476607 425 ntBASIC3.98□□□□□ -1.77
HADHAP40939 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.98□□□□□ -1.77
HADHAP40939 AC110792.1-201ENST00000491826 472 ntBASIC3.98□□□□□ -1.77
HADHAP40939 HMGB1P22-201ENST00000505315 124 ntBASIC3.98□□□□□ -1.77
HADHAP40939 BTF3L4P4-201ENST00000506381 449 ntBASIC3.98□□□□□ -1.77
HADHAP40939 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.98□□□□□ -1.77
HADHAP40939 AC093281.2-201ENST00000510153 597 ntBASIC3.98□□□□□ -1.77
HADHAP40939 AC112673.1-201ENST00000513168 575 ntBASIC3.98□□□□□ -1.77
HADHAP40939 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.98□□□□□ -1.77
HADHAP40939 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HADHAP40939 AC239860.2-201ENST00000525886 270 ntBASIC3.98□□□□□ -1.77
HADHAP40939 AP003461.1-201ENST00000528866 78 ntBASIC3.98□□□□□ -1.77
HADHAP40939 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.98□□□□□ -1.77
HADHAP40939 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.98□□□□□ -1.77
HADHAP40939 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.98□□□□□ -1.77
HADHAP40939 AC141257.3-201ENST00000572906 215 ntBASIC3.98□□□□□ -1.77
HADHAP40939 AC090615.1-201ENST00000577519 154 ntBASIC3.98□□□□□ -1.77
HADHAP40939 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.98□□□□□ -1.77
HADHAP40939 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.98□□□□□ -1.77
HADHAP40939 AL031281.1-201ENST00000604049 488 ntBASIC3.98□□□□□ -1.77
HADHAP40939 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.98□□□□□ -1.77
HADHAP40939 AC034229.5-201ENST00000624258 185 ntBASIC3.98□□□□□ -1.77
HADHAP40939 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.98□□□□□ -1.77
HADHAP40939 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.98□□□□□ -1.77
HADHAP40939 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HADHAP40939 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.98□□□□□ -1.77
HADHAP40939 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HADHAP40939 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HADHAP40939 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HADHAP40939 NCAPGP1-201ENST00000505112 1814 ntBASIC3.98□□□□□ -1.77
HADHAP40939 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HADHAP40939 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HADHAP40939 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HADHAP40939 RNU6-462P-201ENST00000362659 105 ntBASIC3.97□□□□□ -1.77
HADHAP40939 RNU6-1214P-201ENST00000363650 109 ntBASIC3.97□□□□□ -1.77
HADHAP40939 RNA5SP235-201ENST00000365411 114 ntBASIC3.97□□□□□ -1.77
HADHAP40939 HMGN2P8-201ENST00000391458 268 ntBASIC3.97□□□□□ -1.77
HADHAP40939 HLFP1-201ENST00000402375 499 ntBASIC3.97□□□□□ -1.77
HADHAP40939 AL356131.1-201ENST00000405826 414 ntBASIC3.97□□□□□ -1.77
HADHAP40939 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.97□□□□□ -1.77
HADHAP40939 AC245052.5-201ENST00000416320 649 ntBASIC3.97□□□□□ -1.77
HADHAP40939 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.97□□□□□ -1.77
HADHAP40939 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.97□□□□□ -1.77
HADHAP40939 AC007742.1-201ENST00000425789 329 ntBASIC3.97□□□□□ -1.77
HADHAP40939 AC017083.1-201ENST00000428093 483 ntBASIC3.97□□□□□ -1.77
HADHAP40939 AL035407.1-201ENST00000429211 571 ntBASIC3.97□□□□□ -1.77
HADHAP40939 ZYG11AP1-201ENST00000430329 837 ntBASIC3.97□□□□□ -1.77
HADHAP40939 BMS1P19-201ENST00000433925 393 ntBASIC3.97□□□□□ -1.77
HADHAP40939 ELOCP26-201ENST00000436067 329 ntBASIC3.97□□□□□ -1.77
HADHAP40939 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.97□□□□□ -1.77
HADHAP40939 HMGB1P15-201ENST00000453854 435 ntBASIC3.97□□□□□ -1.77
HADHAP40939 MTCO3P20-201ENST00000454926 688 ntBASIC3.97□□□□□ -1.77
HADHAP40939 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.97□□□□□ -1.77
HADHAP40939 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.97□□□□□ -1.77
HADHAP40939 RPL23AP62-201ENST00000463396 453 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms