Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 YPEL5P1-201ENST00000419731 367 ntBASIC2.07□□□□□ -2.08
SNCAP37840 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.07□□□□□ -2.08
SNCAP37840 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SNCAP37840 AL139132.1-201ENST00000431587 344 ntBASIC2.07□□□□□ -2.08
SNCAP37840 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
SNCAP37840 AC011816.1-201ENST00000441346 546 ntBASIC2.07□□□□□ -2.08
SNCAP37840 ARL5AP2-201ENST00000444698 533 ntBASIC2.07□□□□□ -2.08
SNCAP37840 NANOGNBP1-201ENST00000448444 480 ntBASIC2.07□□□□□ -2.08
SNCAP37840 RPS29P12-201ENST00000460178 152 ntBASIC2.07□□□□□ -2.08
SNCAP37840 RPS4XP6-201ENST00000477670 797 ntBASIC2.07□□□□□ -2.08
SNCAP37840 HMGB1P38-201ENST00000490557 577 ntBASIC2.07□□□□□ -2.08
SNCAP37840 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.07□□□□□ -2.08
SNCAP37840 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.07□□□□□ -2.08
SNCAP37840 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
SNCAP37840 HIGD1AP13-201ENST00000509878 289 ntBASIC2.07□□□□□ -2.08
SNCAP37840 RPPH1-2P-201ENST00000516688 293 ntBASIC2.07□□□□□ -2.08
SNCAP37840 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.07□□□□□ -2.08
SNCAP37840 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.07□□□□□ -2.08
SNCAP37840 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.07□□□□□ -2.08
SNCAP37840 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.07□□□□□ -2.08
SNCAP37840 AC024560.3-201ENST00000608482 349 ntBASIC2.07□□□□□ -2.08
SNCAP37840 AL592494.3-201ENST00000609485 464 ntBASIC2.07□□□□□ -2.08
SNCAP37840 AC068831.7-201ENST00000616954 363 ntBASIC2.07□□□□□ -2.08
SNCAP37840 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.07□□□□□ -2.08
SNCAP37840 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.07□□□□□ -2.08
SNCAP37840 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.07□□□□□ -2.08
SNCAP37840 AC091564.4-201ENST00000533934 2194 ntBASIC2.07□□□□□ -2.08
SNCAP37840 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
SNCAP37840 AP000526.1-201ENST00000603308 1388 ntBASIC2.07□□□□□ -2.08
SNCAP37840 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.07□□□□□ -2.08
SNCAP37840 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
SNCAP37840 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SNCAP37840 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.06□□□□□ -2.08
SNCAP37840 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC2.06□□□□□ -2.08
SNCAP37840 RNU1-112P-201ENST00000364401 164 ntBASIC2.06□□□□□ -2.08
SNCAP37840 RNU6-335P-201ENST00000364563 113 ntBASIC2.06□□□□□ -2.08
SNCAP37840 MIR23B-201ENST00000384832 97 ntBASIC2.06□□□□□ -2.08
SNCAP37840 MIR9-1-201ENST00000385198 89 ntBASIC2.06□□□□□ -2.08
SNCAP37840 RN7SKP27-201ENST00000410684 333 ntBASIC2.06□□□□□ -2.08
SNCAP37840 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.06□□□□□ -2.08
SNCAP37840 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.06□□□□□ -2.08
SNCAP37840 RPL5P24-201ENST00000463742 885 ntBASIC2.06□□□□□ -2.08
SNCAP37840 DSTNP2-201ENST00000504533 515 ntBASIC2.06□□□□□ -2.08
SNCAP37840 AC096725.1-201ENST00000514266 313 ntBASIC2.06□□□□□ -2.08
SNCAP37840 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.06□□□□□ -2.08
SNCAP37840 MTCO2P32-201ENST00000514865 403 ntBASIC2.06□□□□□ -2.08
SNCAP37840 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SNCAP37840 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.06□□□□□ -2.08
SNCAP37840 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.06□□□□□ -2.08
SNCAP37840 AC007115.1-201ENST00000546853 234 ntBASIC2.06□□□□□ -2.08
SNCAP37840 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.06□□□□□ -2.08
SNCAP37840 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.06□□□□□ -2.08
SNCAP37840 MIR1254-2-201ENST00000579553 63 ntBASIC2.06□□□□□ -2.08
SNCAP37840 MIR5195-201ENST00000583555 115 ntBASIC2.06□□□□□ -2.08
SNCAP37840 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.06□□□□□ -2.08
SNCAP37840 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.06□□□□□ -2.08
SNCAP37840 HMGN2P28-201ENST00000606102 262 ntBASIC2.06□□□□□ -2.08
SNCAP37840 AC010809.3-201ENST00000621310 641 ntBASIC2.06□□□□□ -2.08
SNCAP37840 AP003122.6-201ENST00000623831 495 ntBASIC2.06□□□□□ -2.08
SNCAP37840 AC138915.1-201ENST00000565427 1685 ntBASIC2.06□□□□□ -2.08
SNCAP37840 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SNCAP37840 SNORD62.1-201ENST00000362541 86 ntBASIC2.05□□□□□ -2.08
SNCAP37840 RNU6-1027P-201ENST00000383998 107 ntBASIC2.05□□□□□ -2.08
SNCAP37840 MTND4P11-201ENST00000417020 1058 ntBASIC2.05□□□□□ -2.08
SNCAP37840 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.05□□□□□ -2.08
SNCAP37840 MORF4L1P6-201ENST00000418771 268 ntBASIC2.05□□□□□ -2.08
SNCAP37840 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.05□□□□□ -2.08
SNCAP37840 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.05□□□□□ -2.08
SNCAP37840 MORF4L1P7-201ENST00000426038 703 ntBASIC2.05□□□□□ -2.08
SNCAP37840 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.05□□□□□ -2.08
SNCAP37840 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.05□□□□□ -2.08
SNCAP37840 RPL23AP33-201ENST00000442301 452 ntBASIC2.05□□□□□ -2.08
SNCAP37840 RPL34P26-201ENST00000445636 354 ntBASIC2.05□□□□□ -2.08
SNCAP37840 RSL24D1P3-201ENST00000449255 495 ntBASIC2.05□□□□□ -2.08
SNCAP37840 AL672167.3-201ENST00000465951 960 ntBASIC2.05□□□□□ -2.08
SNCAP37840 LARP7P4-201ENST00000481075 878 ntBASIC2.05□□□□□ -2.08
SNCAP37840 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.05□□□□□ -2.08
SNCAP37840 IGLV3-17-201ENST00000519099 244 ntBASIC2.05□□□□□ -2.08
SNCAP37840 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.05□□□□□ -2.08
SNCAP37840 CKS1BP7-201ENST00000522230 235 ntBASIC2.05□□□□□ -2.08
SNCAP37840 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.05□□□□□ -2.08
SNCAP37840 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.05□□□□□ -2.08
SNCAP37840 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.05□□□□□ -2.08
SNCAP37840 NOP56P3-201ENST00000549457 385 ntBASIC2.05□□□□□ -2.08
SNCAP37840 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.05□□□□□ -2.08
SNCAP37840 MIR5694-201ENST00000581190 76 ntBASIC2.05□□□□□ -2.08
SNCAP37840 AC024220.1-201ENST00000603675 484 ntBASIC2.05□□□□□ -2.08
SNCAP37840 AL713998.2-201ENST00000604538 1198 ntBASIC2.05□□□□□ -2.08
SNCAP37840 AC007620.3-201ENST00000608131 497 ntBASIC2.05□□□□□ -2.08
SNCAP37840 AL161734.1-201ENST00000609720 557 ntBASIC2.05□□□□□ -2.08
SNCAP37840 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.05□□□□□ -2.08
SNCAP37840 AL645568.2-201ENST00000432815 1337 ntBASIC2.05□□□□□ -2.08
SNCAP37840 MTCO1P24-201ENST00000515438 1558 ntBASIC2.05□□□□□ -2.08
SNCAP37840 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SNCAP37840 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SNCAP37840 RPL21P132-201ENST00000331267 462 ntBASIC2.04□□□□□ -2.08
SNCAP37840 SNORA67.1-201ENST00000364749 141 ntBASIC2.04□□□□□ -2.08
SNCAP37840 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.04□□□□□ -2.08
SNCAP37840 AL138880.1-201ENST00000405824 642 ntBASIC2.04□□□□□ -2.08
SNCAP37840 AL162578.1-201ENST00000406202 378 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms