Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXD12P35452 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXD12P35452 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD12P35452 AC025594.3-201ENST00000613068 790 ntBASIC4.38□□□□□ -1.71
HOXD12P35452 AC099842.1-201ENST00000619919 596 ntBASIC4.38□□□□□ -1.71
HOXD12P35452 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HOXD12P35452 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD12P35452 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD12P35452 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD12P35452 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD12P35452 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
HOXD12P35452 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD12P35452 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD12P35452 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXD12P35452 LINC00561-201ENST00000565815 2738 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HOXD12P35452 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXD12P35452 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXD12P35452 AC027290.2-201ENST00000623210 18662 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXD12P35452 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXD12P35452 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HOXD12P35452 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXD12P35452 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXD12P35452 MIR331-201ENST00000362302 94 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 RNU6-462P-201ENST00000362659 105 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 RNU6-335P-201ENST00000364563 113 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 RNU6-339P-201ENST00000384310 107 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 Y_RNA.619-201ENST00000410951 90 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 OR8G2P-201ENST00000412796 908 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXD12P35452 AC083875.1-201ENST00000419509 405 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 AL365184.2-201ENST00000431139 435 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD12P35452 MTND4P6-201ENST00000438297 472 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD12P35452 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD12P35452 USP9YP29-201ENST00000445112 563 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD12P35452 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXD12P35452 CFTRP1-201ENST00000456646 183 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 TMED11P-201ENST00000479478 690 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 OR5H5P-201ENST00000503164 928 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 AC139783.2-201ENST00000504847 1145 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD12P35452 PPBPP1-201ENST00000510807 373 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD12P35452 RNU6-150P-201ENST00000516237 95 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 SNORA67.7-201ENST00000516664 135 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 TRAV8-5-201ENST00000537369 341 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 OR6C7P-201ENST00000547875 934 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD12P35452 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD12P35452 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.37□□□□□ -1.71
HOXD12P35452 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD12P35452 MIR3158-1-201ENST00000583596 81 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 AL669831.4-202ENST00000590817 238 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXD12P35452 AC006133.1-201ENST00000617106 264 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 AC009509.4-201ENST00000619202 509 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXD12P35452 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXD12P35452 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXD12P35452 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXD12P35452 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXD12P35452 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HOXD12P35452 MTND4P16-201ENST00000466108 1367 ntBASIC4.37□□□□□ -1.71
HOXD12P35452 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXD12P35452 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXD12P35452 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXD12P35452 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD12P35452 AL158163.1-201ENST00000603915 1649 ntBASIC4.36□□□□□ -1.71
HOXD12P35452 SNORA62.3-201ENST00000365110 153 ntBASIC4.36□□□□□ -1.71
HOXD12P35452 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD12P35452 DEFB108C-201ENST00000400154 252 ntBASIC4.36□□□□□ -1.71
HOXD12P35452 RNA5SP56-201ENST00000410277 118 ntBASIC4.36□□□□□ -1.71
HOXD12P35452 AMD1P2-201ENST00000412936 992 ntBASIC4.36□□□□□ -1.71
HOXD12P35452 AL356095.1-201ENST00000417217 199 ntBASIC4.36□□□□□ -1.71
HOXD12P35452 EIF4HP2-201ENST00000424380 563 ntBASIC4.36□□□□□ -1.71
HOXD12P35452 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD12P35452 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXD12P35452 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXD12P35452 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXD12P35452 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXD12P35452 RPS24P1-201ENST00000438550 371 ntBASIC4.36□□□□□ -1.71
HOXD12P35452 AL512326.1-201ENST00000443050 721 ntBASIC4.36□□□□□ -1.71
HOXD12P35452 RPL21P89-201ENST00000444021 467 ntBASIC4.36□□□□□ -1.71
HOXD12P35452 NPM1P49-201ENST00000448027 714 ntBASIC4.36□□□□□ -1.71
HOXD12P35452 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXD12P35452 RNA5SP269-201ENST00000459032 137 ntBASIC4.36□□□□□ -1.71
HOXD12P35452 snoU13.3-201ENST00000459441 104 ntBASIC4.36□□□□□ -1.71
HOXD12P35452 MEMO1P3-201ENST00000459811 302 ntBASIC4.36□□□□□ -1.71
HOXD12P35452 RN7SL691P-201ENST00000494487 301 ntBASIC4.36□□□□□ -1.71
HOXD12P35452 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXD12P35452 MTCO3P44-201ENST00000510977 541 ntBASIC4.36□□□□□ -1.71
HOXD12P35452 AC006499.2-201ENST00000513470 337 ntBASIC4.36□□□□□ -1.71
HOXD12P35452 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXD12P35452 IGLV3-26-201ENST00000520756 302 ntBASIC4.36□□□□□ -1.71
HOXD12P35452 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms