Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.32□□□□□ -1.56
COL8A1P27658 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL8A1P27658 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
COL8A1P27658 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.32□□□□□ -1.56
COL8A1P27658 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.32□□□□□ -1.56
COL8A1P27658 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL8A1P27658 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL8A1P27658 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
COL8A1P27658 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL8A1P27658 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
COL8A1P27658 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
COL8A1P27658 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
COL8A1P27658 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.32□□□□□ -1.56
COL8A1P27658 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.32□□□□□ -1.56
COL8A1P27658 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
COL8A1P27658 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
COL8A1P27658 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A1P27658 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
COL8A1P27658 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.31□□□□□ -1.56
COL8A1P27658 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.31□□□□□ -1.56
COL8A1P27658 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A1P27658 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A1P27658 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
COL8A1P27658 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A1P27658 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.31□□□□□ -1.56
COL8A1P27658 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A1P27658 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A1P27658 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
COL8A1P27658 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A1P27658 DOCK11P1-201ENST00000553480 5932 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 RN7SKP103-201ENST00000363848 320 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 RNU6-188P-201ENST00000364207 107 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 Y_RNA.240-201ENST00000364469 95 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
COL8A1P27658 RNU6-47P-201ENST00000383866 107 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 AC005042.1-201ENST00000393397 800 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 AL133270.1-201ENST00000402635 279 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 RN7SKP51-201ENST00000410781 304 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 Y_RNA.626-201ENST00000411288 95 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 RPL19P1-201ENST00000411635 428 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.31□□□□□ -1.56
COL8A1P27658 UBE2V1P4-201ENST00000425374 344 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 AC010154.1-201ENST00000425857 269 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.31□□□□□ -1.56
COL8A1P27658 AL139148.1-201ENST00000427122 680 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.31□□□□□ -1.56
COL8A1P27658 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.31□□□□□ -1.56
COL8A1P27658 RPL35AP22-201ENST00000436855 335 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.31□□□□□ -1.56
COL8A1P27658 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.31□□□□□ -1.56
COL8A1P27658 RNU7-187P-201ENST00000458985 68 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 RNU7-59P-201ENST00000459101 61 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 RPL7AP10-201ENST00000481016 791 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 RPL7P47-201ENST00000497299 556 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.31□□□□□ -1.56
COL8A1P27658 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.31□□□□□ -1.56
COL8A1P27658 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A1P27658 RNU2-69P-201ENST00000516061 100 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 RNU6-919P-201ENST00000516731 104 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.31□□□□□ -1.56
COL8A1P27658 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
COL8A1P27658 AC025423.5-201ENST00000550230 219 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.31□□□□□ -1.56
COL8A1P27658 FXNP1-201ENST00000555153 337 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.31□□□□□ -1.56
COL8A1P27658 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.31□□□□□ -1.56
COL8A1P27658 RPL23AP92-201ENST00000603609 255 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 AC012443.1-201ENST00000605605 231 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 AC100827.5-201ENST00000615883 426 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 AL590240.4-201ENST00000616908 390 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 AC131009.3-201ENST00000621809 287 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A1P27658 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
COL8A1P27658 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A1P27658 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A1P27658 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.31□□□□□ -1.56
COL8A1P27658 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A1P27658 AL161756.3-201ENST00000641216 2071 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A1P27658 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A1P27658 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A1P27658 SNX18P3-202ENST00000565670 1750 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A1P27658 AC009120.2-204ENST00000621548 2032 ntBASIC5.31□□□□□ -1.56
COL8A1P27658 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.31□□□□□ -1.56
COL8A1P27658 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
COL8A1P27658 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.31□□□□□ -1.56
COL8A1P27658 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.31□□□□□ -1.56
COL8A1P27658 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.31□□□□□ -1.56
COL8A1P27658 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.3□□□□□ -1.56
COL8A1P27658 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL8A1P27658 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL8A1P27658 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL8A1P27658 AL445437.1-201ENST00000623157 3087 ntBASIC5.3□□□□□ -1.56
COL8A1P27658 AC022031.1-201ENST00000585985 2593 ntBASIC5.3□□□□□ -1.56
COL8A1P27658 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL8A1P27658 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
COL8A1P27658 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL8A1P27658 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms