Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC009120.3-201ENST00000563335 499 ntBASIC6.12□□□□□ -1.43
VARSP26640 AC133552.1-201ENST00000569988 4007 ntBASIC6.12□□□□□ -1.43
VARSP26640 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.12□□□□□ -1.43
VARSP26640 AC005332.4-201ENST00000592752 579 ntBASIC6.12□□□□□ -1.43
VARSP26640 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
VARSP26640 RPS29P30-201ENST00000600975 111 ntBASIC6.12□□□□□ -1.43
VARSP26640 AL390123.1-201ENST00000603216 237 ntBASIC6.12□□□□□ -1.43
VARSP26640 SNORA74.4-201ENST00000607595 199 ntBASIC6.12□□□□□ -1.43
VARSP26640 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VARSP26640 MIR6811-201ENST00000620409 58 ntBASIC6.12□□□□□ -1.43
VARSP26640 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.12□□□□□ -1.43
VARSP26640 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.12□□□□□ -1.43
VARSP26640 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
VARSP26640 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
VARSP26640 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.12□□□□□ -1.43
VARSP26640 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
VARSP26640 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VARSP26640 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.11□□□□□ -1.43
VARSP26640 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VARSP26640 AC027228.2-201ENST00000567141 2154 ntBASIC6.11□□□□□ -1.43
VARSP26640 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
VARSP26640 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VARSP26640 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VARSP26640 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
VARSP26640 AC138393.1-203ENST00000327086 343 ntBASIC6.11□□□□□ -1.43
VARSP26640 AL139039.1-201ENST00000401900 692 ntBASIC6.11□□□□□ -1.43
VARSP26640 Y_RNA.793-201ENST00000411222 111 ntBASIC6.11□□□□□ -1.43
VARSP26640 RNU6-516P-201ENST00000411381 104 ntBASIC6.11□□□□□ -1.43
VARSP26640 AL451074.5-201ENST00000415894 435 ntBASIC6.11□□□□□ -1.43
VARSP26640 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC6.11□□□□□ -1.43
VARSP26640 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.11□□□□□ -1.43
VARSP26640 MTCO3P29-201ENST00000432119 779 ntBASIC6.11□□□□□ -1.43
VARSP26640 HMGB3P24-201ENST00000433260 622 ntBASIC6.11□□□□□ -1.43
VARSP26640 AC007679.3-201ENST00000434035 414 ntBASIC6.11□□□□□ -1.43
VARSP26640 AC009963.3-201ENST00000458090 486 ntBASIC6.11□□□□□ -1.43
VARSP26640 AC069499.1-201ENST00000489433 509 ntBASIC6.11□□□□□ -1.43
VARSP26640 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.11□□□□□ -1.43
VARSP26640 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC6.11□□□□□ -1.43
VARSP26640 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.11□□□□□ -1.43
VARSP26640 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.11□□□□□ -1.43
VARSP26640 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.11□□□□□ -1.43
VARSP26640 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.11□□□□□ -1.43
VARSP26640 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.11□□□□□ -1.43
VARSP26640 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.11□□□□□ -1.43
VARSP26640 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.11□□□□□ -1.43
VARSP26640 AL355877.2-201ENST00000603670 358 ntBASIC6.11□□□□□ -1.43
VARSP26640 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.11□□□□□ -1.43
VARSP26640 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.11□□□□□ -1.43
VARSP26640 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.11□□□□□ -1.43
VARSP26640 MIR4302-201ENST00000638058 60 ntBASIC6.11□□□□□ -1.43
VARSP26640 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VARSP26640 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VARSP26640 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.11□□□□□ -1.43
VARSP26640 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VARSP26640 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VARSP26640 DDX18P3-201ENST00000404856 2007 ntBASIC6.11□□□□□ -1.43
VARSP26640 AC079753.1-201ENST00000623243 3868 ntBASIC6.11□□□□□ -1.43
VARSP26640 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VARSP26640 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VARSP26640 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VARSP26640 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VARSP26640 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
VARSP26640 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
VARSP26640 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
VARSP26640 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.1□□□□□ -1.43
VARSP26640 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VARSP26640 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.1□□□□□ -1.43
VARSP26640 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VARSP26640 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC6.1□□□□□ -1.43
VARSP26640 AOX3P-204ENST00000491025 2107 ntBASIC6.1□□□□□ -1.43
VARSP26640 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.1□□□□□ -1.43
VARSP26640 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
VARSP26640 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
VARSP26640 AL122126.1-201ENST00000546905 1318 ntBASIC6.1□□□□□ -1.43
VARSP26640 AC092079.1-201ENST00000558620 1985 ntBASIC6.1□□□□□ -1.43
VARSP26640 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.1□□□□□ -1.43
VARSP26640 Y_RNA.200-201ENST00000364018 102 ntBASIC6.1□□□□□ -1.43
VARSP26640 Y_RNA.237-201ENST00000364439 102 ntBASIC6.1□□□□□ -1.43
VARSP26640 RNA5SP77-201ENST00000365394 120 ntBASIC6.1□□□□□ -1.43
VARSP26640 SMIM11P1-201ENST00000369586 178 ntBASIC6.1□□□□□ -1.43
VARSP26640 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.1□□□□□ -1.43
VARSP26640 Y_RNA.471-201ENST00000384312 102 ntBASIC6.1□□□□□ -1.43
VARSP26640 RNU6-121P-201ENST00000410525 99 ntBASIC6.1□□□□□ -1.43
VARSP26640 RNU6-1203P-201ENST00000410703 110 ntBASIC6.1□□□□□ -1.43
VARSP26640 UBE2D3P2-201ENST00000424409 445 ntBASIC6.1□□□□□ -1.43
VARSP26640 UBE2V1P4-201ENST00000425374 344 ntBASIC6.1□□□□□ -1.43
VARSP26640 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC6.1□□□□□ -1.43
VARSP26640 RPL5P7-201ENST00000444235 813 ntBASIC6.1□□□□□ -1.43
VARSP26640 RPS17P13-201ENST00000448974 407 ntBASIC6.1□□□□□ -1.43
VARSP26640 RPS27AP1-201ENST00000475545 471 ntBASIC6.1□□□□□ -1.43
VARSP26640 AC098869.1-201ENST00000481627 292 ntBASIC6.1□□□□□ -1.43
VARSP26640 RN7SL714P-201ENST00000487050 298 ntBASIC6.1□□□□□ -1.43
VARSP26640 AC018437.1-201ENST00000492214 406 ntBASIC6.1□□□□□ -1.43
VARSP26640 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VARSP26640 AC009643.1-201ENST00000532030 391 ntBASIC6.1□□□□□ -1.43
VARSP26640 AP004609.2-201ENST00000532177 190 ntBASIC6.1□□□□□ -1.43
VARSP26640 AP002770.2-201ENST00000543613 532 ntBASIC6.1□□□□□ -1.43
VARSP26640 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.1□□□□□ -1.43
VARSP26640 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.1□□□□□ -1.43
VARSP26640 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 154.5 ms