Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 BX682237.1-201ENST00000415016 335 ntBASIC3.25□□□□□ -1.89
CCDC172P0C7W6 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC172P0C7W6 MUPP-201ENST00000438111 566 ntBASIC3.25□□□□□ -1.89
CCDC172P0C7W6 AL592437.1-201ENST00000443781 492 ntBASIC3.25□□□□□ -1.89
CCDC172P0C7W6 snoU13.4-201ENST00000458916 104 ntBASIC3.25□□□□□ -1.89
CCDC172P0C7W6 RN7SL601P-201ENST00000471221 293 ntBASIC3.25□□□□□ -1.89
CCDC172P0C7W6 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.25□□□□□ -1.89
CCDC172P0C7W6 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC172P0C7W6 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC172P0C7W6 AP003385.6-201ENST00000531603 374 ntBASIC3.25□□□□□ -1.89
CCDC172P0C7W6 AC092470.1-201ENST00000546187 132 ntBASIC3.25□□□□□ -1.89
CCDC172P0C7W6 AC107016.2-201ENST00000547968 190 ntBASIC3.25□□□□□ -1.89
CCDC172P0C7W6 DNAJC8P1-201ENST00000554535 372 ntBASIC3.25□□□□□ -1.89
CCDC172P0C7W6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC172P0C7W6 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC172P0C7W6 UBL5P2-201ENST00000583788 219 ntBASIC3.25□□□□□ -1.89
CCDC172P0C7W6 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC172P0C7W6 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC172P0C7W6 AL669831.4-202ENST00000590817 238 ntBASIC3.25□□□□□ -1.89
CCDC172P0C7W6 AC125494.3-201ENST00000602759 455 ntBASIC3.25□□□□□ -1.89
CCDC172P0C7W6 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC172P0C7W6 Z99129.2-201ENST00000619967 314 ntBASIC3.25□□□□□ -1.89
CCDC172P0C7W6 AC079228.1-201ENST00000624774 1049 ntBASIC3.25□□□□□ -1.89
CCDC172P0C7W6 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC172P0C7W6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC172P0C7W6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CCDC172P0C7W6 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.25□□□□□ -1.89
CCDC172P0C7W6 MIR22-201ENST00000362190 85 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 RNA5SP72-201ENST00000364442 117 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 MIR7-3-201ENST00000384898 110 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 MIR181B1-201ENST00000385240 110 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CCDC172P0C7W6 SNORD67-201ENST00000390833 111 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 MIR1289-1-201ENST00000408836 144 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC172P0C7W6 RN7SKP220-201ENST00000410611 288 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 AC092745.2-202ENST00000411880 369 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 RPS6P14-201ENST00000425165 719 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 AC005326.1-201ENST00000429197 123 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 AC011242.1-201ENST00000433596 1158 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 RPL21P133-201ENST00000443666 476 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 AC009961.3-201ENST00000449832 765 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC172P0C7W6 BTF3P5-201ENST00000457252 467 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 SNORA84-201ENST00000459229 133 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 RPS17P11-201ENST00000474297 293 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 PRELID3BP6-201ENST00000503839 571 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC172P0C7W6 CIR1P1-201ENST00000524055 1133 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.24□□□□□ -1.89
CCDC172P0C7W6 TRAV11-201ENST00000539512 339 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC172P0C7W6 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC172P0C7W6 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC172P0C7W6 ADAM3B-201ENST00000569937 840 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 AC005412.1-201ENST00000580812 1049 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC172P0C7W6 STMN1P1-201ENST00000617809 440 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 AC024595.1-201ENST00000623088 387 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 AL356118.1-201ENST00000635272 1078 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 AC017104.5-201ENST00000637647 639 ntBASIC3.24□□□□□ -1.89
CCDC172P0C7W6 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CCDC172P0C7W6 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC172P0C7W6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.23□□□□□ -1.89
CCDC172P0C7W6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC172P0C7W6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.23□□□□□ -1.89
CCDC172P0C7W6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC172P0C7W6 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC172P0C7W6 ZNF807-201ENST00000328088 1707 ntBASIC3.23□□□□□ -1.89
CCDC172P0C7W6 RNU6-1226P-201ENST00000384317 107 ntBASIC3.23□□□□□ -1.89
CCDC172P0C7W6 ATP5F1P3-201ENST00000397213 657 ntBASIC3.23□□□□□ -1.89
CCDC172P0C7W6 SSXP10-201ENST00000402595 565 ntBASIC3.23□□□□□ -1.89
CCDC172P0C7W6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC172P0C7W6 RPS3AP9-201ENST00000417027 792 ntBASIC3.23□□□□□ -1.89
CCDC172P0C7W6 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC172P0C7W6 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC172P0C7W6 AC005300.1-201ENST00000428401 373 ntBASIC3.23□□□□□ -1.89
CCDC172P0C7W6 AC073508.1-201ENST00000428866 656 ntBASIC3.23□□□□□ -1.89
CCDC172P0C7W6 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC172P0C7W6 ARL4AP4-201ENST00000434170 518 ntBASIC3.23□□□□□ -1.89
CCDC172P0C7W6 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC172P0C7W6 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC172P0C7W6 RN7SL807P-201ENST00000470923 297 ntBASIC3.23□□□□□ -1.89
CCDC172P0C7W6 GAPDHP39-201ENST00000481866 979 ntBASIC3.23□□□□□ -1.89
CCDC172P0C7W6 OR9N1P-202ENST00000494289 481 ntBASIC3.23□□□□□ -1.89
CCDC172P0C7W6 OR52A4P-203ENST00000498233 1014 ntBASIC3.23□□□□□ -1.89
CCDC172P0C7W6 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC172P0C7W6 AC104057.1-201ENST00000515547 497 ntBASIC3.23□□□□□ -1.89
CCDC172P0C7W6 AC083923.1-201ENST00000523708 376 ntBASIC3.23□□□□□ -1.89
CCDC172P0C7W6 AC022690.1-201ENST00000526681 550 ntBASIC3.23□□□□□ -1.89
CCDC172P0C7W6 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC172P0C7W6 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CCDC172P0C7W6 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC172P0C7W6 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC172P0C7W6 RPL12P50-201ENST00000603116 116 ntBASIC3.23□□□□□ -1.89
CCDC172P0C7W6 HSPE1P14-201ENST00000605812 302 ntBASIC3.23□□□□□ -1.89
CCDC172P0C7W6 AC004775.1-201ENST00000607389 753 ntBASIC3.23□□□□□ -1.89
CCDC172P0C7W6 AC105227.2-201ENST00000615075 605 ntBASIC3.23□□□□□ -1.89
CCDC172P0C7W6 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC172P0C7W6 AL109659.3-201ENST00000624985 950 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms