Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PTMAP5-201ENST00000393073 333 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 RNU2-37P-201ENST00000410695 177 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 AL024507.1-201ENST00000412741 274 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 FCF1P2-201ENST00000415284 583 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 MTCYBP32-201ENST00000427945 1084 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 MTCYBP15-201ENST00000433123 1127 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 COX6CP18-201ENST00000448769 222 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 ELOCP23-201ENST00000452014 332 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 AC244505.3-201ENST00000454598 187 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 RPL7P49-201ENST00000471402 708 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 RPL7P23-201ENST00000493874 747 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 RPL23AP55-201ENST00000498163 452 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 RNU2-58P-201ENST00000516403 183 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 OR4A45P-201ENST00000529954 901 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 MTND5P21-201ENST00000531961 522 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 ZNF415P1-201ENST00000582279 1166 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 AC113368.1-201ENST00000603736 382 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 AC069200.1-201ENST00000609511 323 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 AC012531.5-201ENST00000611375 151 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 AL392048.1-201ENST00000613946 534 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 AC090116.1-201ENST00000615679 446 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 AC073348.1-201ENST00000623002 331 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 AC084035.1-201ENST00000634543 607 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 AF117829.1-206ENST00000621883 3802 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 AL133383.2-201ENST00000622958 2336 ntBASIC2.79□□□□□ -1.96
HLA-DPB1P04440 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AL136520.1-201ENST00000600311 1322 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AL355578.1-201ENST00000607405 1328 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 RNU6-989P-201ENST00000362756 107 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 RNU6-335P-201ENST00000364563 113 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 RNU6-339P-201ENST00000384310 107 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AL035405.1-201ENST00000400795 710 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 RNA5SP56-201ENST00000410277 118 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 RNU4-78P-201ENST00000410940 126 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AC069282.1-201ENST00000411911 526 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AL136133.1-201ENST00000413694 376 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AC005300.1-201ENST00000428401 373 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 NDUFA5P7-201ENST00000452914 242 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 HMGN3P1-201ENST00000453847 193 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 snoU13.3-201ENST00000459441 104 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 SNRPGP3-201ENST00000469405 227 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AP004217.1-201ENST00000480579 346 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 WBP1LP4-201ENST00000505043 344 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 HSPD1P15-201ENST00000505573 1122 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AC005921.1-201ENST00000510589 286 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AC074250.1-201ENST00000511117 192 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AC023141.12-201ENST00000512399 199 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 RN7SKP244-201ENST00000516513 307 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 MTCYBP41-201ENST00000528913 1123 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AP004242.1-201ENST00000533701 349 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 HIGD1AP1-201ENST00000550979 275 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AC010735.1-201ENST00000567305 1026 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AC122134.1-202ENST00000569111 1201 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 MIR4666A-201ENST00000580160 79 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms