Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RNU6-1214P-201ENST00000363650 109 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
MT-ND1P03886 Y_RNA.465-201ENST00000384293 102 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 MIR141-201ENST00000384975 95 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 AF228730.1-201ENST00000397972 663 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 RNA5SP129-201ENST00000410276 118 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.36□□□□□ -1.87
MT-ND1P03886 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.36□□□□□ -1.87
MT-ND1P03886 AC016769.2-201ENST00000414815 475 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 RPL17P36-201ENST00000420302 549 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 MRPS36P1-201ENST00000421291 307 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 RPL31P12-201ENST00000422587 358 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 AC010099.3-201ENST00000423896 409 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.36□□□□□ -1.87
MT-ND1P03886 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.36□□□□□ -1.87
MT-ND1P03886 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.36□□□□□ -1.87
MT-ND1P03886 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.36□□□□□ -1.87
MT-ND1P03886 AC092393.1-201ENST00000439625 742 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 AC009220.1-201ENST00000451614 275 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 HMGB1P15-201ENST00000453854 435 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 AL136097.1-201ENST00000456945 913 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 AC010468.1-201ENST00000461022 817 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.36□□□□□ -1.87
MT-ND1P03886 AC108734.3-201ENST00000481241 1165 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 AC093267.1-201ENST00000489176 961 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.36□□□□□ -1.87
MT-ND1P03886 MTCYBP37-201ENST00000510642 1133 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.36□□□□□ -1.87
MT-ND1P03886 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.36□□□□□ -1.87
MT-ND1P03886 MTCO1P35-201ENST00000515270 228 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.36□□□□□ -1.87
MT-ND1P03886 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.36□□□□□ -1.87
MT-ND1P03886 AC023050.2-201ENST00000544968 387 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.36□□□□□ -1.87
MT-ND1P03886 GTF2IP8-201ENST00000560687 584 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 AL132657.2-201ENST00000564417 358 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.36□□□□□ -1.87
MT-ND1P03886 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.36□□□□□ -1.87
MT-ND1P03886 CLIC4P2-201ENST00000601934 717 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 DUXAP3-201ENST00000603616 594 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 AC006077.1-201ENST00000604746 343 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MT-ND1P03886 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
MT-ND1P03886 AC092650.2-201ENST00000619984 902 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 AP002782.1-201ENST00000623107 614 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 AC120349.3-201ENST00000624377 529 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.36□□□□□ -1.87
MT-ND1P03886 U6.98-201ENST00000637157 84 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 MIR7153-201ENST00000637758 57 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 AP000553.6-201ENST00000641242 118 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MT-ND1P03886 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MT-ND1P03886 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.36□□□□□ -1.87
MT-ND1P03886 AL021368.2-201ENST00000606125 5352 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
MT-ND1P03886 AC024560.2-201ENST00000507981 1497 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
MT-ND1P03886 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 AC004972.1-201ENST00000623934 2209 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 RNU6-50P-201ENST00000362356 103 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 RNU6-492P-201ENST00000363035 104 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 RNU6-1066P-201ENST00000363573 105 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 RNA5SP283-201ENST00000365604 119 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 AC068538.1-201ENST00000376856 336 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 SUGT1P1-201ENST00000379514 476 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
MT-ND1P03886 PTMAP5-201ENST00000393073 333 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 RPL7P60-201ENST00000397636 735 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 MTHFD2P2-201ENST00000407725 247 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 RPL23AP47-201ENST00000408017 460 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 AC007390.1-201ENST00000415722 356 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 AC092634.6-201ENST00000418558 192 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.35□□□□□ -1.87
MT-ND1P03886 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MT-ND1P03886 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.35□□□□□ -1.87
MT-ND1P03886 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.35□□□□□ -1.87
MT-ND1P03886 C4BPAP2-201ENST00000428434 478 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 ATP5F1P1-201ENST00000433775 569 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 AC241584.1-201ENST00000438469 1241 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 AC127537.2-201ENST00000439258 465 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.35□□□□□ -1.87
MT-ND1P03886 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.35□□□□□ -1.87
MT-ND1P03886 RPS3AP46-201ENST00000448352 682 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.35□□□□□ -1.87
MT-ND1P03886 HMGB3P8-201ENST00000449709 577 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.35□□□□□ -1.87
MT-ND1P03886 AC006539.3-201ENST00000454258 129 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.35□□□□□ -1.87
MT-ND1P03886 RNU7-170P-201ENST00000459303 61 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.35□□□□□ -1.87
MT-ND1P03886 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MT-ND1P03886 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.35□□□□□ -1.87
MT-ND1P03886 RPL7P47-201ENST00000497299 556 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 AC020893.1-201ENST00000502452 580 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MT-ND1P03886 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.35□□□□□ -1.87
MT-ND1P03886 AC034244.1-201ENST00000507687 207 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MT-ND1P03886 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.35□□□□□ -1.87
MT-ND1P03886 RNU6-1225P-201ENST00000516336 65 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms