Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.93□□□□□ -1.94
COL1A1P02452 DPH3P2-201ENST00000422618 250 ntBASIC2.93□□□□□ -1.94
COL1A1P02452 MUPP-201ENST00000438111 566 ntBASIC2.93□□□□□ -1.94
COL1A1P02452 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.93□□□□□ -1.94
COL1A1P02452 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.93□□□□□ -1.94
COL1A1P02452 RPS27AP9-201ENST00000477681 438 ntBASIC2.93□□□□□ -1.94
COL1A1P02452 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.93□□□□□ -1.94
COL1A1P02452 AC034244.2-201ENST00000514668 858 ntBASIC2.93□□□□□ -1.94
COL1A1P02452 RNA5SP458-201ENST00000516188 119 ntBASIC2.93□□□□□ -1.94
COL1A1P02452 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
COL1A1P02452 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.93□□□□□ -1.94
COL1A1P02452 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.93□□□□□ -1.94
COL1A1P02452 MIR4716-201ENST00000579628 84 ntBASIC2.93□□□□□ -1.94
COL1A1P02452 MIR5092-201ENST00000583139 88 ntBASIC2.93□□□□□ -1.94
COL1A1P02452 GMCL1P2-201ENST00000605230 823 ntBASIC2.93□□□□□ -1.94
COL1A1P02452 AC010680.4-201ENST00000605334 543 ntBASIC2.93□□□□□ -1.94
COL1A1P02452 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.93□□□□□ -1.94
COL1A1P02452 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.93□□□□□ -1.94
COL1A1P02452 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
COL1A1P02452 RPL21P132-201ENST00000331267 462 ntBASIC2.92□□□□□ -1.94
COL1A1P02452 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
COL1A1P02452 AL079342.1-201ENST00000401460 267 ntBASIC2.92□□□□□ -1.94
COL1A1P02452 RNU4-26P-201ENST00000410270 107 ntBASIC2.92□□□□□ -1.94
COL1A1P02452 AL138785.1-201ENST00000425821 331 ntBASIC2.92□□□□□ -1.94
COL1A1P02452 AC104389.3-201ENST00000445629 235 ntBASIC2.92□□□□□ -1.94
COL1A1P02452 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.92□□□□□ -1.94
COL1A1P02452 AC092436.1-201ENST00000506450 503 ntBASIC2.92□□□□□ -1.94
COL1A1P02452 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.92□□□□□ -1.94
COL1A1P02452 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.92□□□□□ -1.94
COL1A1P02452 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
COL1A1P02452 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.92□□□□□ -1.94
COL1A1P02452 AL442163.2-201ENST00000553912 710 ntBASIC2.92□□□□□ -1.94
COL1A1P02452 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.92□□□□□ -1.94
COL1A1P02452 MIR4506-201ENST00000584693 77 ntBASIC2.92□□□□□ -1.94
COL1A1P02452 AC083899.3-201ENST00000603413 594 ntBASIC2.92□□□□□ -1.94
COL1A1P02452 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.92□□□□□ -1.94
COL1A1P02452 MIR1291-201ENST00000627649 87 ntBASIC2.92□□□□□ -1.94
COL1A1P02452 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.92□□□□□ -1.94
COL1A1P02452 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.92□□□□□ -1.94
COL1A1P02452 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL1A1P02452 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
COL1A1P02452 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL1A1P02452 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
COL1A1P02452 AC066616.2-201ENST00000559334 1481 ntBASIC2.91□□□□□ -1.94
COL1A1P02452 Y_RNA.164-201ENST00000363709 102 ntBASIC2.91□□□□□ -1.94
COL1A1P02452 AC098592.2-201ENST00000413158 265 ntBASIC2.91□□□□□ -1.94
COL1A1P02452 AL137014.1-201ENST00000420490 1226 ntBASIC2.91□□□□□ -1.94
COL1A1P02452 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
COL1A1P02452 AC096638.1-201ENST00000444678 216 ntBASIC2.91□□□□□ -1.94
COL1A1P02452 HMGN1P5-201ENST00000448591 263 ntBASIC2.91□□□□□ -1.94
COL1A1P02452 SEPT7P6-201ENST00000469999 1143 ntBASIC2.91□□□□□ -1.94
COL1A1P02452 SEC11B-201ENST00000518383 499 ntBASIC2.91□□□□□ -1.94
COL1A1P02452 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.91□□□□□ -1.94
COL1A1P02452 MTCO3P13-201ENST00000577757 781 ntBASIC2.91□□□□□ -1.94
COL1A1P02452 FAM106CP-201ENST00000582212 507 ntBASIC2.91□□□□□ -1.94
COL1A1P02452 PSMA6P4-201ENST00000603247 718 ntBASIC2.91□□□□□ -1.94
COL1A1P02452 AC096586.2-201ENST00000610260 441 ntBASIC2.91□□□□□ -1.94
COL1A1P02452 BX664608.1-201ENST00000610519 487 ntBASIC2.91□□□□□ -1.94
COL1A1P02452 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL1A1P02452 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.91□□□□□ -1.94
COL1A1P02452 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
COL1A1P02452 CUL1P1-201ENST00000509510 2425 ntBASIC2.91□□□□□ -1.94
COL1A1P02452 EXOC5P1-201ENST00000510543 1969 ntBASIC2.91□□□□□ -1.94
COL1A1P02452 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.91□□□□□ -1.94
COL1A1P02452 MTND5P6-201ENST00000422338 1798 ntBASIC2.91□□□□□ -1.94
COL1A1P02452 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.9□□□□□ -1.94
COL1A1P02452 AL158825.1-201ENST00000414735 521 ntBASIC2.9□□□□□ -1.94
COL1A1P02452 MTCO2P17-201ENST00000424336 677 ntBASIC2.9□□□□□ -1.94
COL1A1P02452 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.9□□□□□ -1.94
COL1A1P02452 HMGN2P3-201ENST00000433603 273 ntBASIC2.9□□□□□ -1.94
COL1A1P02452 HMGN2P5-201ENST00000436882 273 ntBASIC2.9□□□□□ -1.94
COL1A1P02452 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
COL1A1P02452 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.9□□□□□ -1.94
COL1A1P02452 CACYBPP1-201ENST00000438592 684 ntBASIC2.9□□□□□ -1.94
COL1A1P02452 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.9□□□□□ -1.94
COL1A1P02452 ACTR6P1-201ENST00000514311 1104 ntBASIC2.9□□□□□ -1.94
COL1A1P02452 RNA5SP385-201ENST00000515947 110 ntBASIC2.9□□□□□ -1.94
COL1A1P02452 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.9□□□□□ -1.94
COL1A1P02452 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.9□□□□□ -1.94
COL1A1P02452 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.9□□□□□ -1.94
COL1A1P02452 ELOCP31-201ENST00000540463 467 ntBASIC2.9□□□□□ -1.94
COL1A1P02452 AC009977.1-201ENST00000586015 570 ntBASIC2.9□□□□□ -1.94
COL1A1P02452 AC002076.2-201ENST00000617362 122 ntBASIC2.9□□□□□ -1.94
COL1A1P02452 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.9□□□□□ -1.94
COL1A1P02452 AC080128.1-201ENST00000474389 1917 ntBASIC2.9□□□□□ -1.94
COL1A1P02452 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
COL1A1P02452 MAPK10-322ENST00000641485 4530 ntBASIC2.9□□□□□ -1.95
COL1A1P02452 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
COL1A1P02452 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
COL1A1P02452 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
COL1A1P02452 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
COL1A1P02452 Y_RNA.40-201ENST00000362645 93 ntBASIC2.9□□□□□ -1.95
COL1A1P02452 SNORD114-1-201ENST00000362705 72 ntBASIC2.9□□□□□ -1.95
COL1A1P02452 AC007064.1-201ENST00000412238 351 ntBASIC2.9□□□□□ -1.95
COL1A1P02452 ATG3P1-201ENST00000419507 911 ntBASIC2.9□□□□□ -1.95
COL1A1P02452 RAB9AP5-201ENST00000437794 597 ntBASIC2.9□□□□□ -1.95
COL1A1P02452 RAB9AP2-201ENST00000443911 597 ntBASIC2.9□□□□□ -1.95
COL1A1P02452 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.9□□□□□ -1.95
COL1A1P02452 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.9□□□□□ -1.95
COL1A1P02452 LINC00888-204ENST00000487386 421 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms