Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 LUZP4P1-201ENST00000415420 344 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AC011242.1-201ENST00000433596 1158 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 TRIM60P18-201ENST00000441518 828 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 ELOCP13-201ENST00000443934 329 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AC079776.3-201ENST00000450665 370 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 BTF3P5-201ENST00000457252 467 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AC091179.1-201ENST00000461606 579 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AC010285.1-201ENST00000470580 392 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 RPL7P5-201ENST00000471472 736 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 VPS26AP1-201ENST00000483197 979 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AC026402.1-201ENST00000513642 170 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AC109635.4-202ENST00000531666 412 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AC007536.1-201ENST00000533382 349 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 OR4T1P-201ENST00000554933 911 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 RN7SL703P-201ENST00000578485 302 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AL022067.1-201ENST00000602426 454 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AC103881.1-201ENST00000603476 538 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AC009237.15-201ENST00000610252 501 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AC006329.2-201ENST00000611491 394 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AC024941.1-201ENST00000612250 334 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AC018755.4-201ENST00000619715 454 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 AP001350.1-201ENST00000601906 1524 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 SUGT1P1-201ENST00000379514 476 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 RNU6-213P-201ENST00000384051 104 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 RSL24D1P1-201ENST00000404972 493 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 RNU2-28P-201ENST00000410457 189 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 MTND4P3-201ENST00000417829 541 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AC245054.1-201ENST00000420944 258 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 RPL21P66-201ENST00000426566 466 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AL591419.1-201ENST00000427423 339 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 YWHAZP7-201ENST00000436906 631 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AL662791.1-201ENST00000441992 928 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 MTCO1P48-201ENST00000448024 1096 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 ARPC3P2-201ENST00000457786 533 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 CAB39P1-201ENST00000502277 460 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 BOLA3P3-201ENST00000505182 232 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 NPM1P41-201ENST00000512920 831 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 APOOP4-201ENST00000513530 597 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 MTCO1P49-201ENST00000523429 802 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AC118942.1-201ENST00000529674 1035 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AL121603.1-201ENST00000553815 142 ntBASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DQA1P01909 AC022916.3-201ENST00000592961 742 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms