Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AC007546.1-201ENST00000619452 559 ntBASIC4.36□□□□□ -1.71
TOP3BO95985 BMS1P21-201ENST00000634565 365 ntBASIC4.36□□□□□ -1.71
TOP3BO95985 AC012442.3-202ENST00000636742 206 ntBASIC4.36□□□□□ -1.71
TOP3BO95985 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.36□□□□□ -1.71
TOP3BO95985 AC090971.4-201ENST00000560291 1800 ntBASIC4.36□□□□□ -1.71
TOP3BO95985 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TOP3BO95985 AC107982.1-201ENST00000507171 1300 ntBASIC4.36□□□□□ -1.71
TOP3BO95985 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TOP3BO95985 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.36□□□□□ -1.71
TOP3BO95985 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TOP3BO95985 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TOP3BO95985 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
TOP3BO95985 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TOP3BO95985 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
TOP3BO95985 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.36□□□□□ -1.71
TOP3BO95985 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TOP3BO95985 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.36□□□□□ -1.71
TOP3BO95985 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.35□□□□□ -1.71
TOP3BO95985 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TOP3BO95985 MTND5P26-201ENST00000426018 1752 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TOP3BO95985 AC008033.1-201ENST00000216407 1162 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 RNA5SP513-201ENST00000364648 118 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 Y_RNA.554-201ENST00000384672 102 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 SNORD66.1-201ENST00000391230 76 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.35□□□□□ -1.71
TOP3BO95985 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.35□□□□□ -1.71
TOP3BO95985 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TOP3BO95985 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TOP3BO95985 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.35□□□□□ -1.71
TOP3BO95985 MTND3P21-201ENST00000433774 331 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.35□□□□□ -1.71
TOP3BO95985 RPL12P46-201ENST00000436610 195 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.35□□□□□ -1.71
TOP3BO95985 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TOP3BO95985 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.35□□□□□ -1.71
TOP3BO95985 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.35□□□□□ -1.71
TOP3BO95985 VN1R10P-201ENST00000447106 875 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.35□□□□□ -1.71
TOP3BO95985 AC239809.1-201ENST00000450470 217 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 ABCF2P2-201ENST00000450549 296 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 NF1P3-201ENST00000457709 450 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.35□□□□□ -1.71
TOP3BO95985 VN1R105P-201ENST00000486595 910 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TOP3BO95985 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TOP3BO95985 RN7SKP298-201ENST00000515950 94 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 RNA5SP154-201ENST00000516193 111 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.35□□□□□ -1.71
TOP3BO95985 IGHV3-32-201ENST00000519182 355 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.35□□□□□ -1.71
TOP3BO95985 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.35□□□□□ -1.71
TOP3BO95985 DEFB108A-201ENST00000530110 222 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 AL121579.1-201ENST00000555129 305 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.35□□□□□ -1.71
TOP3BO95985 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.35□□□□□ -1.71
TOP3BO95985 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.35□□□□□ -1.71
TOP3BO95985 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.35□□□□□ -1.71
TOP3BO95985 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.35□□□□□ -1.71
TOP3BO95985 MIR548AB-201ENST00000584917 84 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.35□□□□□ -1.71
TOP3BO95985 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.35□□□□□ -1.71
TOP3BO95985 AC008687.2-201ENST00000597865 520 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 AC007014.2-201ENST00000615581 479 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 AC104985.2-201ENST00000620598 500 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 AC092794.2-201ENST00000620933 563 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 AC005858.4-201ENST00000623191 700 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 AL356596.1-201ENST00000624230 379 ntBASIC4.35□□□□□ -1.71
TOP3BO95985 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.35□□□□□ -1.71
TOP3BO95985 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TOP3BO95985 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
TOP3BO95985 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
TOP3BO95985 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
TOP3BO95985 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TOP3BO95985 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TOP3BO95985 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.35□□□□□ -1.71
TOP3BO95985 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TOP3BO95985 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.34□□□□□ -1.71
TOP3BO95985 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TOP3BO95985 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.34□□□□□ -1.71
TOP3BO95985 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TOP3BO95985 AC018529.3-201ENST00000624212 2254 ntBASIC4.34□□□□□ -1.71
TOP3BO95985 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
TOP3BO95985 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
TOP3BO95985 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
TOP3BO95985 RHOT1P2-201ENST00000366423 333 ntBASIC4.34□□□□□ -1.71
TOP3BO95985 RNU6-146P-201ENST00000384602 108 ntBASIC4.34□□□□□ -1.71
TOP3BO95985 AL583835.1-201ENST00000399570 407 ntBASIC4.34□□□□□ -1.71
TOP3BO95985 RNU6ATAC-201ENST00000408749 126 ntBASIC4.34□□□□□ -1.71
TOP3BO95985 RN7SKP56-201ENST00000410513 331 ntBASIC4.34□□□□□ -1.71
TOP3BO95985 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.34□□□□□ -1.71
TOP3BO95985 PRELID3BP11-201ENST00000414230 479 ntBASIC4.34□□□□□ -1.71
TOP3BO95985 FCF1P2-201ENST00000415284 583 ntBASIC4.34□□□□□ -1.71
TOP3BO95985 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.34□□□□□ -1.71
TOP3BO95985 RPL21P32-201ENST00000419877 477 ntBASIC4.34□□□□□ -1.71
TOP3BO95985 MTCO3P1-205ENST00000422088 832 ntBASIC4.34□□□□□ -1.71
TOP3BO95985 COX6CP15-201ENST00000426313 211 ntBASIC4.34□□□□□ -1.71
TOP3BO95985 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.34□□□□□ -1.71
TOP3BO95985 AC018644.1-201ENST00000429934 551 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms