Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.49□□□□□ -2.01
CPSF4O95639 C1DP5-201ENST00000525775 383 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.49□□□□□ -2.01
CPSF4O95639 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.49□□□□□ -2.01
CPSF4O95639 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.49□□□□□ -2.01
CPSF4O95639 AC079600.2-201ENST00000550076 130 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 CR383656.14-201ENST00000551951 406 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.49□□□□□ -2.01
CPSF4O95639 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.49□□□□□ -2.01
CPSF4O95639 AC012254.4-201ENST00000588843 273 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.49□□□□□ -2.01
CPSF4O95639 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.49□□□□□ -2.01
CPSF4O95639 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.49□□□□□ -2.01
CPSF4O95639 AL359198.2-201ENST00000611836 194 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 AL442067.2-201ENST00000614033 363 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 RNU6-156P-201ENST00000621869 107 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.49□□□□□ -2.01
CPSF4O95639 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.49□□□□□ -2.01
CPSF4O95639 AC117529.2-201ENST00000512159 2068 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 AC073346.2-201ENST00000624724 2058 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CPSF4O95639 ZNF807-201ENST00000328088 1707 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CPSF4O95639 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CPSF4O95639 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
CPSF4O95639 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.48□□□□□ -2.01
CPSF4O95639 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.48□□□□□ -2.01
CPSF4O95639 ENSAP3-201ENST00000312710 333 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.48□□□□□ -2.01
CPSF4O95639 AL356057.3-201ENST00000402607 340 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 RNA5SP21-201ENST00000410917 96 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.48□□□□□ -2.01
CPSF4O95639 NEK4P1-201ENST00000433383 879 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 SETP5-201ENST00000437270 562 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.48□□□□□ -2.01
CPSF4O95639 MRPL35P4-201ENST00000453682 566 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.48□□□□□ -2.01
CPSF4O95639 AC008565.1-201ENST00000509046 885 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 AC026412.2-201ENST00000512270 1075 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.48□□□□□ -2.01
CPSF4O95639 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.48□□□□□ -2.01
CPSF4O95639 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.48□□□□□ -2.01
CPSF4O95639 CKS1BP7-201ENST00000522230 235 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 AC083923.1-201ENST00000523708 376 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 AP003102.1-201ENST00000525638 661 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.48□□□□□ -2.01
CPSF4O95639 OR7K1P-201ENST00000546439 926 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 AC123904.3-201ENST00000547218 814 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.48□□□□□ -2.01
CPSF4O95639 ZNF92P2-201ENST00000600543 1059 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 AL356575.1-201ENST00000603008 283 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 RNA5SP108-201ENST00000605921 117 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.48□□□□□ -2.01
CPSF4O95639 AL021368.1-201ENST00000607490 540 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 STMN1P1-201ENST00000617809 440 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 MIR6864-201ENST00000617935 70 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 AL163051.2-201ENST00000618976 735 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 AC024595.1-201ENST00000623088 387 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 MTCO1P18-201ENST00000455518 1419 ntBASIC2.48□□□□□ -2.01
CPSF4O95639 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CPSF4O95639 TAB3P1-202ENST00000452645 1634 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CPSF4O95639 RNA5SP27-201ENST00000363839 119 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 RNU6-650P-201ENST00000365658 111 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 EIF5P1-201ENST00000400019 1231 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 HSPE1P26-201ENST00000405341 275 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 RNU2-21P-201ENST00000410368 188 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 UBE2V1P11-201ENST00000411559 285 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 AC092745.2-202ENST00000411880 369 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.47□□□□□ -2.01
CPSF4O95639 VN1R42P-201ENST00000424651 344 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 MTND4P15-201ENST00000437913 1033 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 RPS24P13-201ENST00000442520 397 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.47□□□□□ -2.01
CPSF4O95639 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.47□□□□□ -2.01
CPSF4O95639 HMGB1P48-201ENST00000446155 598 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 AP000705.1-201ENST00000454567 350 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 S100A11P2-201ENST00000467589 312 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 AC078918.1-201ENST00000498515 228 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 CAB39P1-201ENST00000502277 460 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.47□□□□□ -2.01
CPSF4O95639 RN7SKP234-201ENST00000517173 224 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.47□□□□□ -2.01
CPSF4O95639 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.47□□□□□ -2.01
CPSF4O95639 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.47□□□□□ -2.01
CPSF4O95639 AC027104.1-201ENST00000563702 681 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 ZNF192P1-203ENST00000565888 810 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.47□□□□□ -2.01
CPSF4O95639 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.47□□□□□ -2.01
CPSF4O95639 AC096947.1-201ENST00000603233 470 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.47□□□□□ -2.01
CPSF4O95639 AL671309.1-201ENST00000603750 544 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 AC011468.4-201ENST00000603942 409 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 FRG1HP-204ENST00000617940 757 ntBASIC2.47□□□□□ -2.01
CPSF4O95639 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.47□□□□□ -2.01
CPSF4O95639 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms