Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 DEFB131E-202ENST00000602581 683 ntBASIC5.72□□□□□ -1.49
RAPGEF3O95398 AC079089.3-201ENST00000603094 673 ntBASIC5.72□□□□□ -1.49
RAPGEF3O95398 AC068276.1-201ENST00000605793 379 ntBASIC5.72□□□□□ -1.49
RAPGEF3O95398 AC100793.4-201ENST00000613683 429 ntBASIC5.72□□□□□ -1.49
RAPGEF3O95398 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 MIR7112-201ENST00000616126 65 ntBASIC5.72□□□□□ -1.49
RAPGEF3O95398 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 AC025048.6-202ENST00000627667 438 ntBASIC5.72□□□□□ -1.49
RAPGEF3O95398 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAPGEF3O95398 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAPGEF3O95398 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAPGEF3O95398 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAPGEF3O95398 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RAPGEF3O95398 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.71□□□□□ -1.5
RAPGEF3O95398 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RAPGEF3O95398 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RAPGEF3O95398 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RAPGEF3O95398 CR383658.2-201ENST00000547576 1525 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 RNU4-44P-201ENST00000363050 141 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 RNU6-660P-201ENST00000364566 109 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RAPGEF3O95398 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAPGEF3O95398 AL603766.1-201ENST00000407763 664 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 RNU2-16P-201ENST00000410712 136 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.71□□□□□ -1.5
RAPGEF3O95398 SDCBPP2-201ENST00000424643 885 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 IPMKP1-201ENST00000425988 855 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.71□□□□□ -1.5
RAPGEF3O95398 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.71□□□□□ -1.5
RAPGEF3O95398 BMI1P1-201ENST00000445879 941 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.71□□□□□ -1.5
RAPGEF3O95398 SNRPGP9-201ENST00000456025 225 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 ARPC3P2-201ENST00000457786 533 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 RNA5SP269-201ENST00000459032 137 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.71□□□□□ -1.5
RAPGEF3O95398 AC025518.1-201ENST00000479856 347 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 MTCYBP17-201ENST00000503579 789 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.71□□□□□ -1.5
RAPGEF3O95398 AC079140.3-201ENST00000511111 550 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 RNU2-27P-201ENST00000516185 142 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.71□□□□□ -1.5
RAPGEF3O95398 AP000790.1-201ENST00000528891 737 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 AC103843.2-201ENST00000530523 682 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.71□□□□□ -1.5
RAPGEF3O95398 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.71□□□□□ -1.5
RAPGEF3O95398 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.71□□□□□ -1.5
RAPGEF3O95398 AC012414.6-201ENST00000568241 401 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 AC107294.1-201ENST00000609524 467 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 AC009509.4-201ENST00000619202 509 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 MIR7702-201ENST00000621931 59 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 AC231657.1-201ENST00000624313 397 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.71□□□□□ -1.5
RAPGEF3O95398 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAPGEF3O95398 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.71□□□□□ -1.5
RAPGEF3O95398 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RAPGEF3O95398 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.71□□□□□ -1.5
RAPGEF3O95398 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
RAPGEF3O95398 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAPGEF3O95398 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.7□□□□□ -1.5
RAPGEF3O95398 MTCO1P23-201ENST00000415223 1526 ntBASIC5.7□□□□□ -1.5
RAPGEF3O95398 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RAPGEF3O95398 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAPGEF3O95398 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RAPGEF3O95398 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RAPGEF3O95398 AC004022.2-201ENST00000413824 193 ntBASIC5.7□□□□□ -1.5
RAPGEF3O95398 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAPGEF3O95398 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.7□□□□□ -1.5
RAPGEF3O95398 USP9YP36-201ENST00000424581 829 ntBASIC5.7□□□□□ -1.5
RAPGEF3O95398 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.7□□□□□ -1.5
RAPGEF3O95398 AL031736.2-201ENST00000426573 787 ntBASIC5.7□□□□□ -1.5
RAPGEF3O95398 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAPGEF3O95398 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.7□□□□□ -1.5
RAPGEF3O95398 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.7□□□□□ -1.5
RAPGEF3O95398 ATP5JP1-201ENST00000431631 322 ntBASIC5.7□□□□□ -1.5
RAPGEF3O95398 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.7□□□□□ -1.5
RAPGEF3O95398 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.7□□□□□ -1.5
RAPGEF3O95398 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.7□□□□□ -1.5
RAPGEF3O95398 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.7□□□□□ -1.5
RAPGEF3O95398 AC092427.1-201ENST00000439177 601 ntBASIC5.7□□□□□ -1.5
RAPGEF3O95398 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.7□□□□□ -1.5
RAPGEF3O95398 ST13P20-201ENST00000447996 1065 ntBASIC5.7□□□□□ -1.5
RAPGEF3O95398 AC239809.1-201ENST00000450470 217 ntBASIC5.7□□□□□ -1.5
RAPGEF3O95398 AC010301.1-201ENST00000473936 355 ntBASIC5.7□□□□□ -1.5
RAPGEF3O95398 MTCYBP43-201ENST00000513621 740 ntBASIC5.7□□□□□ -1.5
RAPGEF3O95398 AC010342.1-201ENST00000514047 877 ntBASIC5.7□□□□□ -1.5
RAPGEF3O95398 RNU6-513P-201ENST00000516104 104 ntBASIC5.7□□□□□ -1.5
RAPGEF3O95398 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.7□□□□□ -1.5
RAPGEF3O95398 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.7□□□□□ -1.5
RAPGEF3O95398 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.7□□□□□ -1.5
RAPGEF3O95398 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.7□□□□□ -1.5
RAPGEF3O95398 AL389895.1-201ENST00000554127 252 ntBASIC5.7□□□□□ -1.5
RAPGEF3O95398 AP001004.1-201ENST00000582468 324 ntBASIC5.7□□□□□ -1.5
RAPGEF3O95398 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.7□□□□□ -1.5
RAPGEF3O95398 AC243773.3-201ENST00000613270 256 ntBASIC5.7□□□□□ -1.5
RAPGEF3O95398 AC079684.1-201ENST00000621405 437 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms