Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 ERHP2-201ENST00000402323 299 ntBASIC3.67□□□□□ -1.82
SIX3O95343 RPS3AP25-201ENST00000411660 793 ntBASIC3.67□□□□□ -1.82
SIX3O95343 AMD1P2-201ENST00000412936 992 ntBASIC3.67□□□□□ -1.82
SIX3O95343 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.67□□□□□ -1.82
SIX3O95343 AL137014.1-201ENST00000420490 1226 ntBASIC3.67□□□□□ -1.82
SIX3O95343 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.67□□□□□ -1.82
SIX3O95343 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SIX3O95343 AL117339.2-201ENST00000430475 180 ntBASIC3.67□□□□□ -1.82
SIX3O95343 MTND2P5-201ENST00000432656 1006 ntBASIC3.67□□□□□ -1.82
SIX3O95343 NDUFB1P1-201ENST00000435191 180 ntBASIC3.67□□□□□ -1.82
SIX3O95343 CYCSP43-201ENST00000438233 310 ntBASIC3.67□□□□□ -1.82
SIX3O95343 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.67□□□□□ -1.82
SIX3O95343 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.67□□□□□ -1.82
SIX3O95343 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.67□□□□□ -1.82
SIX3O95343 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.67□□□□□ -1.82
SIX3O95343 ANP32BP2-201ENST00000454525 545 ntBASIC3.67□□□□□ -1.82
SIX3O95343 AC023424.2-201ENST00000493479 777 ntBASIC3.67□□□□□ -1.82
SIX3O95343 AC134050.1-201ENST00000495088 933 ntBASIC3.67□□□□□ -1.82
SIX3O95343 TMEM251P1-201ENST00000503717 318 ntBASIC3.67□□□□□ -1.82
SIX3O95343 COX7A2P2-201ENST00000505291 250 ntBASIC3.67□□□□□ -1.82
SIX3O95343 HMGB1P22-201ENST00000505315 124 ntBASIC3.67□□□□□ -1.82
SIX3O95343 KLHL2P1-201ENST00000508691 521 ntBASIC3.67□□□□□ -1.82
SIX3O95343 SCARNA14-201ENST00000516903 136 ntBASIC3.67□□□□□ -1.82
SIX3O95343 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
SIX3O95343 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.67□□□□□ -1.82
SIX3O95343 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.67□□□□□ -1.82
SIX3O95343 HSPE1P3-201ENST00000559254 309 ntBASIC3.67□□□□□ -1.82
SIX3O95343 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.67□□□□□ -1.82
SIX3O95343 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.67□□□□□ -1.82
SIX3O95343 MTND1P8-201ENST00000571424 950 ntBASIC3.67□□□□□ -1.82
SIX3O95343 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.67□□□□□ -1.82
SIX3O95343 SRGNP1-201ENST00000603392 451 ntBASIC3.67□□□□□ -1.82
SIX3O95343 AC012531.5-201ENST00000611375 151 ntBASIC3.67□□□□□ -1.82
SIX3O95343 AC096577.2-201ENST00000611455 153 ntBASIC3.67□□□□□ -1.82
SIX3O95343 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.67□□□□□ -1.82
SIX3O95343 AC013470.4-201ENST00000619978 986 ntBASIC3.67□□□□□ -1.82
SIX3O95343 AC004009.2-201ENST00000623016 728 ntBASIC3.67□□□□□ -1.82
SIX3O95343 AC068787.1-201ENST00000623908 691 ntBASIC3.67□□□□□ -1.82
SIX3O95343 OR4G3P-201ENST00000633500 913 ntBASIC3.67□□□□□ -1.82
SIX3O95343 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.67□□□□□ -1.82
SIX3O95343 OR6C71P-202ENST00000641886 1107 ntBASIC3.67□□□□□ -1.82
SIX3O95343 AL672296.1-201ENST00000427780 2158 ntBASIC3.67□□□□□ -1.82
SIX3O95343 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIX3O95343 AL133383.2-201ENST00000622958 2336 ntBASIC3.67□□□□□ -1.82
SIX3O95343 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIX3O95343 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIX3O95343 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIX3O95343 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIX3O95343 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SIX3O95343 SNORA72.3-201ENST00000365074 132 ntBASIC3.66□□□□□ -1.82
SIX3O95343 SNORD116.1-201ENST00000365628 92 ntBASIC3.66□□□□□ -1.82
SIX3O95343 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SIX3O95343 AL031679.1-201ENST00000400616 525 ntBASIC3.66□□□□□ -1.82
SIX3O95343 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX3O95343 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.66□□□□□ -1.82
SIX3O95343 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX3O95343 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX3O95343 AL121871.1-201ENST00000443413 436 ntBASIC3.66□□□□□ -1.82
SIX3O95343 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.66□□□□□ -1.82
SIX3O95343 MTCO3P20-201ENST00000454926 688 ntBASIC3.66□□□□□ -1.82
SIX3O95343 SUMO2P2-201ENST00000456482 255 ntBASIC3.66□□□□□ -1.82
SIX3O95343 CEACAMP4-201ENST00000457676 421 ntBASIC3.66□□□□□ -1.82
SIX3O95343 OR9M1P-201ENST00000459641 921 ntBASIC3.66□□□□□ -1.82
SIX3O95343 RPL23AP62-201ENST00000463396 453 ntBASIC3.66□□□□□ -1.82
SIX3O95343 SNRPGP3-201ENST00000469405 227 ntBASIC3.66□□□□□ -1.82
SIX3O95343 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX3O95343 AC090453.1-201ENST00000495560 436 ntBASIC3.66□□□□□ -1.82
SIX3O95343 AC068305.1-201ENST00000497406 726 ntBASIC3.66□□□□□ -1.82
SIX3O95343 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.66□□□□□ -1.82
SIX3O95343 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX3O95343 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX3O95343 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX3O95343 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.66□□□□□ -1.82
SIX3O95343 RNY4P37-201ENST00000516225 96 ntBASIC3.66□□□□□ -1.82
SIX3O95343 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.66□□□□□ -1.82
SIX3O95343 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX3O95343 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SIX3O95343 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SIX3O95343 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX3O95343 AL121576.1-201ENST00000556055 276 ntBASIC3.66□□□□□ -1.82
SIX3O95343 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.66□□□□□ -1.82
SIX3O95343 ZNF192P1-203ENST00000565888 810 ntBASIC3.66□□□□□ -1.82
SIX3O95343 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.66□□□□□ -1.82
SIX3O95343 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.66□□□□□ -1.82
SIX3O95343 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.66□□□□□ -1.82
SIX3O95343 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX3O95343 AC012669.1-201ENST00000603209 283 ntBASIC3.66□□□□□ -1.82
SIX3O95343 AC011468.4-201ENST00000603942 409 ntBASIC3.66□□□□□ -1.82
SIX3O95343 AP001330.4-201ENST00000604350 154 ntBASIC3.66□□□□□ -1.82
SIX3O95343 AC006270.3-201ENST00000605967 1036 ntBASIC3.66□□□□□ -1.82
SIX3O95343 AC090425.2-201ENST00000608818 501 ntBASIC3.66□□□□□ -1.82
SIX3O95343 AL590240.3-201ENST00000621416 943 ntBASIC3.66□□□□□ -1.82
SIX3O95343 AC039056.2-201ENST00000622261 511 ntBASIC3.66□□□□□ -1.82
SIX3O95343 AC090772.4-201ENST00000623599 362 ntBASIC3.66□□□□□ -1.82
SIX3O95343 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.66□□□□□ -1.82
SIX3O95343 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.66□□□□□ -1.82
SIX3O95343 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIX3O95343 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
SIX3O95343 AC005539.1-201ENST00000443768 1479 ntBASIC3.66□□□□□ -1.82
SIX3O95343 AL390862.1-201ENST00000635467 1469 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms