Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.78□□□□□ -1.64
CDKL5O76039 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.78□□□□□ -1.64
CDKL5O76039 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.78□□□□□ -1.64
CDKL5O76039 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDKL5O76039 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDKL5O76039 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.78□□□□□ -1.64
CDKL5O76039 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDKL5O76039 MTCO1P14-201ENST00000441695 1559 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDKL5O76039 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CDKL5O76039 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDKL5O76039 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.77□□□□□ -1.65
CDKL5O76039 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.77□□□□□ -1.65
CDKL5O76039 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDKL5O76039 MARK2P15-201ENST00000432204 2186 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 IQCB2P-201ENST00000401788 1633 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDKL5O76039 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDKL5O76039 Y_RNA.97-201ENST00000363094 102 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 RNU6-216P-201ENST00000363282 104 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 SNORD74.4-201ENST00000364129 80 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 RNU5E-5P-201ENST00000365379 116 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.77□□□□□ -1.65
CDKL5O76039 RNU6-1122P-201ENST00000384449 107 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 MIR181A1-201ENST00000385026 110 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDKL5O76039 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.77□□□□□ -1.65
CDKL5O76039 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.77□□□□□ -1.65
CDKL5O76039 AC108032.1-201ENST00000416706 207 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 AIMP1P1-201ENST00000418670 937 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.77□□□□□ -1.65
CDKL5O76039 AC073069.1-201ENST00000428657 441 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 RPL12P46-201ENST00000436610 195 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CDKL5O76039 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.77□□□□□ -1.65
CDKL5O76039 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.77□□□□□ -1.65
CDKL5O76039 RPL26P28-201ENST00000451325 435 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 RPL38P1-201ENST00000460914 211 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 RN7SL481P-201ENST00000477764 299 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 AC105137.1-201ENST00000484355 562 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.77□□□□□ -1.65
CDKL5O76039 AC022483.1-201ENST00000514020 567 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.77□□□□□ -1.65
CDKL5O76039 AP003730.1-201ENST00000524605 285 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.77□□□□□ -1.65
CDKL5O76039 DEFB131D-201ENST00000526803 184 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.77□□□□□ -1.65
CDKL5O76039 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.77□□□□□ -1.65
CDKL5O76039 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.77□□□□□ -1.65
CDKL5O76039 AL121579.1-201ENST00000555129 305 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 MIR3913-1-201ENST00000577744 102 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 AC091488.1-201ENST00000604239 660 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 AC012603.1-201ENST00000606424 528 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 OR6R2P-201ENST00000609216 300 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 MIR7151-201ENST00000617477 60 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.77□□□□□ -1.65
CDKL5O76039 AC138649.3-201ENST00000622154 254 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.77□□□□□ -1.65
CDKL5O76039 AC026634.1-201ENST00000634369 198 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 CRYM-AS1-204ENST00000637983 556 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
CDKL5O76039 CYP1D1P-201ENST00000416662 1433 ntBASIC4.77□□□□□ -1.65
CDKL5O76039 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDKL5O76039 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
CDKL5O76039 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDKL5O76039 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CDKL5O76039 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDKL5O76039 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
CDKL5O76039 AL049555.1-201ENST00000562834 1933 ntBASIC4.76□□□□□ -1.65
CDKL5O76039 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDKL5O76039 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDKL5O76039 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDKL5O76039 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.76□□□□□ -1.65
CDKL5O76039 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDKL5O76039 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDKL5O76039 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.76□□□□□ -1.65
CDKL5O76039 RNA5SP443-201ENST00000363083 132 ntBASIC4.76□□□□□ -1.65
CDKL5O76039 SNORD35B-201ENST00000363660 87 ntBASIC4.76□□□□□ -1.65
CDKL5O76039 RNU4-12P-201ENST00000365233 139 ntBASIC4.76□□□□□ -1.65
CDKL5O76039 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDKL5O76039 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDKL5O76039 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CDKL5O76039 AC025750.1-201ENST00000399891 379 ntBASIC4.76□□□□□ -1.65
CDKL5O76039 RNU6-272P-201ENST00000411028 104 ntBASIC4.76□□□□□ -1.65
CDKL5O76039 HMGB1P11-201ENST00000413899 637 ntBASIC4.76□□□□□ -1.65
CDKL5O76039 HMGB3P23-201ENST00000414981 585 ntBASIC4.76□□□□□ -1.65
CDKL5O76039 RPS27AP14-201ENST00000422868 454 ntBASIC4.76□□□□□ -1.65
CDKL5O76039 GLRXP1-201ENST00000423261 334 ntBASIC4.76□□□□□ -1.65
CDKL5O76039 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.76□□□□□ -1.65
CDKL5O76039 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.76□□□□□ -1.65
CDKL5O76039 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.76□□□□□ -1.65
CDKL5O76039 AP000936.3-201ENST00000438127 255 ntBASIC4.76□□□□□ -1.65
CDKL5O76039 CBX1P4-201ENST00000439415 457 ntBASIC4.76□□□□□ -1.65
CDKL5O76039 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.76□□□□□ -1.65
CDKL5O76039 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.76□□□□□ -1.65
CDKL5O76039 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.76□□□□□ -1.65
CDKL5O76039 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.76□□□□□ -1.65
CDKL5O76039 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
CDKL5O76039 S100A11P1-201ENST00000477525 312 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms