Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.48□□□□□ -1.69
VPS4BO75351 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.48□□□□□ -1.69
VPS4BO75351 AC007742.1-201ENST00000425789 329 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 EZH2P1-201ENST00000431167 291 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 RPEP2-201ENST00000432149 701 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 ELOCP26-201ENST00000436067 329 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS4BO75351 AC005154.2-201ENST00000438110 379 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 FAM103A2P-201ENST00000444122 354 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 AC073587.1-201ENST00000447093 876 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 RPS26P28-201ENST00000470806 348 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 RPS3AP17-201ENST00000472594 777 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.48□□□□□ -1.69
VPS4BO75351 AC034222.1-201ENST00000494052 532 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 AC012170.1-201ENST00000495139 359 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.48□□□□□ -1.69
VPS4BO75351 KCTD9P5-201ENST00000504141 1170 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS4BO75351 TXNP6-201ENST00000510190 310 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.48□□□□□ -1.69
VPS4BO75351 SNORD116-26-201ENST00000516006 96 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.48□□□□□ -1.69
VPS4BO75351 AC092470.1-201ENST00000546187 132 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.48□□□□□ -1.69
VPS4BO75351 AC068446.3-201ENST00000555285 382 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
VPS4BO75351 AP005119.2-201ENST00000579735 1105 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 MIR3682-201ENST00000581338 84 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS4BO75351 AL109618.2-201ENST00000605527 211 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS4BO75351 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS4BO75351 MIR6716-201ENST00000613413 80 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS4BO75351 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
VPS4BO75351 AC091905.2-201ENST00000623143 306 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 FAM157B-203ENST00000639350 358 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
VPS4BO75351 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
VPS4BO75351 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.48□□□□□ -1.69
VPS4BO75351 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
VPS4BO75351 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS4BO75351 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS4BO75351 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS4BO75351 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS4BO75351 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS4BO75351 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS4BO75351 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS4BO75351 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
VPS4BO75351 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
VPS4BO75351 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS4BO75351 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS4BO75351 Y_RNA.46-201ENST00000362695 102 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 RNA5SP447-201ENST00000363749 119 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 RNA5SP22-201ENST00000365393 109 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS4BO75351 Y_RNA.554-201ENST00000384672 102 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 ENSAP1-201ENST00000392855 326 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 RPL31P1-201ENST00000398116 372 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 BTBD10P2-201ENST00000404779 676 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 RN7SKP267-201ENST00000410381 285 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS4BO75351 EIF4EP1-201ENST00000422311 642 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 AL590233.1-201ENST00000430017 456 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.47□□□□□ -1.69
VPS4BO75351 AC016831.4-201ENST00000438302 307 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 PSPHP1-201ENST00000450062 261 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS4BO75351 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.47□□□□□ -1.69
VPS4BO75351 MTCO3P38-201ENST00000468910 766 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 RPL21P129-201ENST00000491732 478 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 RNU2-46P-201ENST00000517038 113 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS4BO75351 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS4BO75351 AC234778.2-201ENST00000566241 354 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 AC009101.1-201ENST00000568135 242 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS4BO75351 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS4BO75351 AC053481.3-201ENST00000577881 843 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 MIR3160-1-201ENST00000577972 85 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 RN7SL176P-201ENST00000580352 264 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 AC023575.1-201ENST00000580510 358 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS4BO75351 HMGN1P30-201ENST00000589286 268 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS4BO75351 AC113194.1-201ENST00000606037 500 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 AL592295.2-201ENST00000612578 206 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS4BO75351 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS4BO75351 CR381653.2-201ENST00000624041 768 ntBASIC4.47□□□□□ -1.69
VPS4BO75351 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS4BO75351 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
VPS4BO75351 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
VPS4BO75351 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS4BO75351 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS4BO75351 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS4BO75351 AC105074.1-201ENST00000623380 3095 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms