Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 AL392048.1-201ENST00000613946 534 ntBASIC3.18□□□□□ -1.9
CDH16O75309 AL360181.4-201ENST00000621752 134 ntBASIC3.18□□□□□ -1.9
CDH16O75309 AL118508.4-201ENST00000624142 1176 ntBASIC3.18□□□□□ -1.9
CDH16O75309 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH16O75309 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.18□□□□□ -1.9
CDH16O75309 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDH16O75309 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDH16O75309 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDH16O75309 AC130650.2-201ENST00000618736 2403 ntBASIC3.18□□□□□ -1.9
CDH16O75309 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDH16O75309 AC110774.1-201ENST00000623567 2018 ntBASIC3.17□□□□□ -1.9
CDH16O75309 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH16O75309 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH16O75309 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDH16O75309 U3.19-201ENST00000390893 196 ntBASIC3.17□□□□□ -1.9
CDH16O75309 AL354719.1-201ENST00000406535 843 ntBASIC3.17□□□□□ -1.9
CDH16O75309 RNA5SP274-201ENST00000410484 108 ntBASIC3.17□□□□□ -1.9
CDH16O75309 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH16O75309 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDH16O75309 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.17□□□□□ -1.9
CDH16O75309 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.17□□□□□ -1.9
CDH16O75309 AL035410.1-201ENST00000427409 427 ntBASIC3.17□□□□□ -1.9
CDH16O75309 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH16O75309 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.17□□□□□ -1.9
CDH16O75309 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH16O75309 HMGB1P25-201ENST00000468402 607 ntBASIC3.17□□□□□ -1.9
CDH16O75309 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH16O75309 AC006483.1-201ENST00000487308 313 ntBASIC3.17□□□□□ -1.9
CDH16O75309 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH16O75309 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH16O75309 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDH16O75309 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH16O75309 PRELID3BP4-201ENST00000515476 571 ntBASIC3.17□□□□□ -1.9
CDH16O75309 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH16O75309 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.17□□□□□ -1.9
CDH16O75309 AP000916.1-201ENST00000533869 835 ntBASIC3.17□□□□□ -1.9
CDH16O75309 AC011611.1-201ENST00000552179 197 ntBASIC3.17□□□□□ -1.9
CDH16O75309 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH16O75309 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH16O75309 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH16O75309 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH16O75309 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH16O75309 AC005951.1-201ENST00000576706 485 ntBASIC3.17□□□□□ -1.9
CDH16O75309 MIR5186-201ENST00000577504 120 ntBASIC3.17□□□□□ -1.9
CDH16O75309 AC092474.3-201ENST00000603022 568 ntBASIC3.17□□□□□ -1.9
CDH16O75309 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.17□□□□□ -1.9
CDH16O75309 AC003001.2-201ENST00000616294 831 ntBASIC3.17□□□□□ -1.9
CDH16O75309 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH16O75309 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH16O75309 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH16O75309 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CDH16O75309 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CDH16O75309 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CDH16O75309 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDH16O75309 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH16O75309 FAM35CP-201ENST00000554755 2470 ntBASIC3.16□□□□□ -1.9
CDH16O75309 MTND5P7-201ENST00000413558 1798 ntBASIC3.16□□□□□ -1.9
CDH16O75309 MTCO1P12-201ENST00000414273 1543 ntBASIC3.16□□□□□ -1.9
CDH16O75309 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH16O75309 RNU1-101P-201ENST00000391171 127 ntBASIC3.16□□□□□ -1.9
CDH16O75309 TAF9BP1-201ENST00000396646 746 ntBASIC3.16□□□□□ -1.9
CDH16O75309 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CDH16O75309 AL121978.1-201ENST00000402778 359 ntBASIC3.16□□□□□ -1.9
CDH16O75309 AL158050.1-201ENST00000416077 457 ntBASIC3.16□□□□□ -1.9
CDH16O75309 AC245052.5-201ENST00000416320 649 ntBASIC3.16□□□□□ -1.9
CDH16O75309 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH16O75309 AC233728.2-201ENST00000425348 757 ntBASIC3.16□□□□□ -1.9
CDH16O75309 DUTP6-201ENST00000425573 462 ntBASIC3.16□□□□□ -1.9
CDH16O75309 YME1L1P1-201ENST00000429435 297 ntBASIC3.16□□□□□ -1.9
CDH16O75309 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH16O75309 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH16O75309 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH16O75309 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH16O75309 AL136126.1-201ENST00000473603 402 ntBASIC3.16□□□□□ -1.9
CDH16O75309 RPS4XP6-201ENST00000477670 797 ntBASIC3.16□□□□□ -1.9
CDH16O75309 AP004217.1-201ENST00000480579 346 ntBASIC3.16□□□□□ -1.9
CDH16O75309 RPL7P23-201ENST00000493874 747 ntBASIC3.16□□□□□ -1.9
CDH16O75309 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDH16O75309 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDH16O75309 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDH16O75309 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH16O75309 MTND4LP22-201ENST00000508209 276 ntBASIC3.16□□□□□ -1.9
CDH16O75309 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH16O75309 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDH16O75309 RNU6-711P-201ENST00000517255 106 ntBASIC3.16□□□□□ -1.9
CDH16O75309 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH16O75309 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.16□□□□□ -1.9
CDH16O75309 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.16□□□□□ -1.9
CDH16O75309 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH16O75309 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.16□□□□□ -1.9
CDH16O75309 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH16O75309 AL162713.1-201ENST00000604480 262 ntBASIC3.16□□□□□ -1.9
CDH16O75309 AC006329.2-201ENST00000611491 394 ntBASIC3.16□□□□□ -1.9
CDH16O75309 VN1R9P-201ENST00000614184 867 ntBASIC3.16□□□□□ -1.9
CDH16O75309 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.16□□□□□ -1.9
CDH16O75309 AC095031.1-201ENST00000623685 672 ntBASIC3.16□□□□□ -1.9
CDH16O75309 AC106730.3-201ENST00000624568 641 ntBASIC3.16□□□□□ -1.9
CDH16O75309 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDH16O75309 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH16O75309 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms