Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 Z99127.2-201ENST00000441426 334 ntBASIC3.57□□□□□ -1.84
NPHP4O75161 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.57□□□□□ -1.84
NPHP4O75161 RWDD4P1-201ENST00000488019 565 ntBASIC3.57□□□□□ -1.84
NPHP4O75161 RPL9P6-201ENST00000492764 598 ntBASIC3.57□□□□□ -1.84
NPHP4O75161 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.57□□□□□ -1.84
NPHP4O75161 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.57□□□□□ -1.84
NPHP4O75161 AC018630.1-201ENST00000541376 925 ntBASIC3.57□□□□□ -1.84
NPHP4O75161 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.57□□□□□ -1.84
NPHP4O75161 AC074029.1-201ENST00000552531 1044 ntBASIC3.57□□□□□ -1.84
NPHP4O75161 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.57□□□□□ -1.84
NPHP4O75161 AC022884.3-201ENST00000579571 248 ntBASIC3.57□□□□□ -1.84
NPHP4O75161 HMGB1P51-201ENST00000605166 638 ntBASIC3.57□□□□□ -1.84
NPHP4O75161 AC005046.1-201ENST00000608515 625 ntBASIC3.57□□□□□ -1.84
NPHP4O75161 AL391834.1-201ENST00000609609 560 ntBASIC3.57□□□□□ -1.84
NPHP4O75161 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.57□□□□□ -1.84
NPHP4O75161 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NPHP4O75161 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NPHP4O75161 ADAM3A-203ENST00000461344 2157 ntBASIC3.57□□□□□ -1.84
NPHP4O75161 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.56□□□□□ -1.84
NPHP4O75161 AL161781.1-201ENST00000354277 403 ntBASIC3.56□□□□□ -1.84
NPHP4O75161 RNU6-225P-201ENST00000384613 103 ntBASIC3.56□□□□□ -1.84
NPHP4O75161 MIR181A2-201ENST00000384863 110 ntBASIC3.56□□□□□ -1.84
NPHP4O75161 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NPHP4O75161 RNU6-244P-201ENST00000391028 104 ntBASIC3.56□□□□□ -1.84
NPHP4O75161 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.56□□□□□ -1.84
NPHP4O75161 AIMP1P1-201ENST00000418670 937 ntBASIC3.56□□□□□ -1.84
NPHP4O75161 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.56□□□□□ -1.84
NPHP4O75161 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NPHP4O75161 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
NPHP4O75161 HMGB1P15-201ENST00000453854 435 ntBASIC3.56□□□□□ -1.84
NPHP4O75161 AC104629.2-201ENST00000468627 598 ntBASIC3.56□□□□□ -1.84
NPHP4O75161 AC092185.1-201ENST00000491371 97 ntBASIC3.56□□□□□ -1.84
NPHP4O75161 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NPHP4O75161 HAUS1P1-201ENST00000505275 832 ntBASIC3.56□□□□□ -1.84
NPHP4O75161 AP001317.1-201ENST00000531194 960 ntBASIC3.56□□□□□ -1.84
NPHP4O75161 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.56□□□□□ -1.84
NPHP4O75161 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.56□□□□□ -1.84
NPHP4O75161 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.56□□□□□ -1.84
NPHP4O75161 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.56□□□□□ -1.84
NPHP4O75161 AL391597.1-201ENST00000618707 694 ntBASIC3.56□□□□□ -1.84
NPHP4O75161 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NPHP4O75161 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
NPHP4O75161 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NPHP4O75161 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.56□□□□□ -1.84
NPHP4O75161 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NPHP4O75161 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
NPHP4O75161 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NPHP4O75161 AL021368.2-201ENST00000606125 5352 ntBASIC3.56□□□□□ -1.84
NPHP4O75161 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.55□□□□□ -1.84
NPHP4O75161 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPHP4O75161 RNU6-670P-201ENST00000364312 104 ntBASIC3.55□□□□□ -1.84
NPHP4O75161 AL024474.1-201ENST00000404655 591 ntBASIC3.55□□□□□ -1.84
NPHP4O75161 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NPHP4O75161 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.55□□□□□ -1.84
NPHP4O75161 Z85994.2-201ENST00000434327 452 ntBASIC3.55□□□□□ -1.84
NPHP4O75161 ST13P20-201ENST00000447996 1065 ntBASIC3.55□□□□□ -1.84
NPHP4O75161 RPL7P52-201ENST00000449200 742 ntBASIC3.55□□□□□ -1.84
NPHP4O75161 TRBV1-201ENST00000476502 284 ntBASIC3.55□□□□□ -1.84
NPHP4O75161 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
NPHP4O75161 MTND4P2-201ENST00000507767 1203 ntBASIC3.55□□□□□ -1.84
NPHP4O75161 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.55□□□□□ -1.84
NPHP4O75161 RNA5SP281-201ENST00000516504 135 ntBASIC3.55□□□□□ -1.84
NPHP4O75161 AC100870.1-201ENST00000522035 505 ntBASIC3.55□□□□□ -1.84
NPHP4O75161 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.55□□□□□ -1.84
NPHP4O75161 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.55□□□□□ -1.84
NPHP4O75161 AC010620.2-201ENST00000600135 313 ntBASIC3.55□□□□□ -1.84
NPHP4O75161 AL136981.2-201ENST00000617319 734 ntBASIC3.55□□□□□ -1.84
NPHP4O75161 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPHP4O75161 MTND5P27-201ENST00000428871 1720 ntBASIC3.55□□□□□ -1.84
NPHP4O75161 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
NPHP4O75161 AC016717.2-201ENST00000609089 5141 ntBASIC3.55□□□□□ -1.84
NPHP4O75161 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPHP4O75161 AL353743.4-201ENST00000422653 1547 ntBASIC3.55□□□□□ -1.84
NPHP4O75161 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.55□□□□□ -1.84
NPHP4O75161 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.54□□□□□ -1.84
NPHP4O75161 AC069218.2-201ENST00000411665 344 ntBASIC3.54□□□□□ -1.84
NPHP4O75161 RPS29P6-201ENST00000438196 145 ntBASIC3.54□□□□□ -1.84
NPHP4O75161 AC011816.1-201ENST00000441346 546 ntBASIC3.54□□□□□ -1.84
NPHP4O75161 AL353898.1-201ENST00000444055 238 ntBASIC3.54□□□□□ -1.84
NPHP4O75161 RN7SL499P-201ENST00000481141 276 ntBASIC3.54□□□□□ -1.84
NPHP4O75161 AC005912.1-201ENST00000495392 255 ntBASIC3.54□□□□□ -1.84
NPHP4O75161 ATG10-AS1-201ENST00000504846 648 ntBASIC3.54□□□□□ -1.84
NPHP4O75161 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.54□□□□□ -1.84
NPHP4O75161 AC093331.1-201ENST00000521474 169 ntBASIC3.54□□□□□ -1.84
NPHP4O75161 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.54□□□□□ -1.84
NPHP4O75161 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.54□□□□□ -1.84
NPHP4O75161 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NPHP4O75161 PSMA6P4-201ENST00000603247 718 ntBASIC3.54□□□□□ -1.84
NPHP4O75161 AC104237.2-201ENST00000612456 443 ntBASIC3.54□□□□□ -1.84
NPHP4O75161 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.54□□□□□ -1.84
NPHP4O75161 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NPHP4O75161 MTND5P6-201ENST00000422338 1798 ntBASIC3.54□□□□□ -1.84
NPHP4O75161 Z73965.1-201ENST00000623412 2297 ntBASIC3.54□□□□□ -1.84
NPHP4O75161 AC008264.2-201ENST00000610193 3731 ntBASIC3.54□□□□□ -1.84
NPHP4O75161 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
NPHP4O75161 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
NPHP4O75161 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
NPHP4O75161 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NPHP4O75161 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPHP4O75161 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms