Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.76□□□□□ -1.81
CHD1O14646 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CHD1O14646 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.76□□□□□ -1.81
CHD1O14646 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CHD1O14646 AC072039.1-201ENST00000477611 581 ntBASIC3.75□□□□□ -1.81
CHD1O14646 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.75□□□□□ -1.81
CHD1O14646 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.75□□□□□ -1.81
CHD1O14646 VN1R80P-201ENST00000597126 338 ntBASIC3.75□□□□□ -1.81
CHD1O14646 FRG1DP-201ENST00000635586 771 ntBASIC3.75□□□□□ -1.81
CHD1O14646 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CHD1O14646 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
CHD1O14646 NEAT1-202ENST00000501122 22743 ntBASIC3.75□□□□□ -1.81
CHD1O14646 AC066616.2-201ENST00000559334 1481 ntBASIC3.75□□□□□ -1.81
CHD1O14646 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CHD1O14646 Y_RNA.116-201ENST00000363292 103 ntBASIC3.75□□□□□ -1.81
CHD1O14646 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.75□□□□□ -1.81
CHD1O14646 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.75□□□□□ -1.81
CHD1O14646 CYCSP49-201ENST00000420810 319 ntBASIC3.75□□□□□ -1.81
CHD1O14646 MTATP6P11-201ENST00000428071 670 ntBASIC3.75□□□□□ -1.81
CHD1O14646 RPL7P54-201ENST00000438336 674 ntBASIC3.75□□□□□ -1.81
CHD1O14646 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.75□□□□□ -1.81
CHD1O14646 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CHD1O14646 CBX3P5-201ENST00000552017 521 ntBASIC3.75□□□□□ -1.81
CHD1O14646 AC128687.1-201ENST00000605304 619 ntBASIC3.75□□□□□ -1.81
CHD1O14646 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.75□□□□□ -1.81
CHD1O14646 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.75□□□□□ -1.81
CHD1O14646 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CHD1O14646 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CHD1O14646 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CHD1O14646 AL158825.1-201ENST00000414735 521 ntBASIC3.74□□□□□ -1.81
CHD1O14646 HSPE1P18-201ENST00000517602 280 ntBASIC3.74□□□□□ -1.81
CHD1O14646 MIR5007-201ENST00000583098 95 ntBASIC3.74□□□□□ -1.81
CHD1O14646 AC004520.1-201ENST00000608362 1413 ntBASIC3.74□□□□□ -1.81
CHD1O14646 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CHD1O14646 RNU6-805P-201ENST00000365643 106 ntBASIC3.73□□□□□ -1.81
CHD1O14646 RNU2-2P-201ENST00000410396 191 ntBASIC3.73□□□□□ -1.81
CHD1O14646 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.73□□□□□ -1.81
CHD1O14646 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.73□□□□□ -1.81
CHD1O14646 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.73□□□□□ -1.81
CHD1O14646 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.73□□□□□ -1.81
CHD1O14646 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.73□□□□□ -1.81
CHD1O14646 AC090819.1-201ENST00000523800 1111 ntBASIC3.73□□□□□ -1.81
CHD1O14646 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CHD1O14646 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.73□□□□□ -1.81
CHD1O14646 U2.15-201ENST00000611544 191 ntBASIC3.73□□□□□ -1.81
CHD1O14646 U2.16-201ENST00000613119 191 ntBASIC3.73□□□□□ -1.81
CHD1O14646 U2.12-201ENST00000613778 191 ntBASIC3.73□□□□□ -1.81
CHD1O14646 U2.20-201ENST00000613956 192 ntBASIC3.73□□□□□ -1.81
CHD1O14646 U2.9-201ENST00000615427 191 ntBASIC3.73□□□□□ -1.81
CHD1O14646 U2.11-201ENST00000616345 191 ntBASIC3.73□□□□□ -1.81
CHD1O14646 U2.2-201ENST00000616535 191 ntBASIC3.73□□□□□ -1.81
CHD1O14646 U2.3-201ENST00000617785 191 ntBASIC3.73□□□□□ -1.81
CHD1O14646 U2.19-201ENST00000618602 191 ntBASIC3.73□□□□□ -1.81
CHD1O14646 RNU2-1-201ENST00000618664 191 ntBASIC3.73□□□□□ -1.81
CHD1O14646 U2.6-201ENST00000619225 191 ntBASIC3.73□□□□□ -1.81
CHD1O14646 U2.5-201ENST00000619465 191 ntBASIC3.73□□□□□ -1.81
CHD1O14646 U2.10-201ENST00000620268 191 ntBASIC3.73□□□□□ -1.81
CHD1O14646 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CHD1O14646 AL133412.1-201ENST00000380194 2992 ntBASIC3.73□□□□□ -1.81
CHD1O14646 AC009487.4-201ENST00000624969 3585 ntBASIC3.73□□□□□ -1.81
CHD1O14646 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CHD1O14646 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
CHD1O14646 SNORA26.9-201ENST00000391322 122 ntBASIC3.73□□□□□ -1.81
CHD1O14646 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.73□□□□□ -1.81
CHD1O14646 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.73□□□□□ -1.81
CHD1O14646 USP9YP5-201ENST00000511770 630 ntBASIC3.73□□□□□ -1.81
CHD1O14646 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.73□□□□□ -1.81
CHD1O14646 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.73□□□□□ -1.81
CHD1O14646 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.73□□□□□ -1.81
CHD1O14646 AC103710.1-201ENST00000610003 901 ntBASIC3.73□□□□□ -1.81
CHD1O14646 MIR6766-201ENST00000622641 72 ntBASIC3.73□□□□□ -1.81
CHD1O14646 MFSD8-245ENST00000641743 948 ntBASIC3.73□□□□□ -1.81
CHD1O14646 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CHD1O14646 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CHD1O14646 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.72□□□□□ -1.81
CHD1O14646 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CHD1O14646 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CHD1O14646 AL139156.1-201ENST00000412785 841 ntBASIC3.72□□□□□ -1.81
CHD1O14646 AL034379.1-201ENST00000423216 253 ntBASIC3.72□□□□□ -1.81
CHD1O14646 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.72□□□□□ -1.81
CHD1O14646 SNORD13-201ENST00000459299 104 ntBASIC3.72□□□□□ -1.81
CHD1O14646 BMS1P7-201ENST00000602440 1052 ntBASIC3.72□□□□□ -1.81
CHD1O14646 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.72□□□□□ -1.81
CHD1O14646 AC017076.1-201ENST00000607613 578 ntBASIC3.72□□□□□ -1.81
CHD1O14646 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.72□□□□□ -1.81
CHD1O14646 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CHD1O14646 MIR219B-201ENST00000637023 88 ntBASIC3.72□□□□□ -1.81
CHD1O14646 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CHD1O14646 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CHD1O14646 MAPK10-322ENST00000641485 4530 ntBASIC3.71□□□□□ -1.81
CHD1O14646 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CHD1O14646 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
CHD1O14646 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CHD1O14646 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.71□□□□□ -1.82
CHD1O14646 AP004372.1-201ENST00000604842 844 ntBASIC3.71□□□□□ -1.82
CHD1O14646 AC067852.7-201ENST00000623270 535 ntBASIC3.71□□□□□ -1.82
CHD1O14646 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CHD1O14646 FAT1P1-201ENST00000406588 507 ntBASIC3.7□□□□□ -1.82
CHD1O14646 LUZP4P1-201ENST00000415420 344 ntBASIC3.7□□□□□ -1.82
CHD1O14646 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms