Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AL662791.1-201ENST00000441992 928 ntBASIC3.79□□□□□ -1.8
O00370 AC073387.1-201ENST00000453261 709 ntBASIC3.79□□□□□ -1.8
O00370 PNPLA4P1-201ENST00000458328 305 ntBASIC3.79□□□□□ -1.8
O00370 SNORD105B-201ENST00000458770 79 ntBASIC3.79□□□□□ -1.8
O00370 HMGB3P15-201ENST00000507326 574 ntBASIC3.79□□□□□ -1.8
O00370 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.79□□□□□ -1.8
O00370 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.79□□□□□ -1.8
O00370 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.79□□□□□ -1.8
O00370 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.79□□□□□ -1.8
O00370 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.79□□□□□ -1.8
O00370 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.79□□□□□ -1.8
O00370 Y_RNA.717-201ENST00000517106 92 ntBASIC3.79□□□□□ -1.8
O00370 AC026403.1-201ENST00000518938 295 ntBASIC3.79□□□□□ -1.8
O00370 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.79□□□□□ -1.8
O00370 MIR3158-1-201ENST00000583596 81 ntBASIC3.79□□□□□ -1.8
O00370 SNORD39.3-201ENST00000584451 71 ntBASIC3.79□□□□□ -1.8
O00370 AC061975.8-201ENST00000587058 721 ntBASIC3.79□□□□□ -1.8
O00370 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.79□□□□□ -1.8
O00370 AC131235.4-201ENST00000609288 620 ntBASIC3.79□□□□□ -1.8
O00370 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
O00370 AC107075.1-201ENST00000613695 314 ntBASIC3.79□□□□□ -1.8
O00370 AC097520.1-201ENST00000624435 385 ntBASIC3.79□□□□□ -1.8
O00370 AC006927.4-201ENST00000639187 543 ntBASIC3.79□□□□□ -1.8
O00370 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
O00370 AL359893.1-201ENST00000447628 1580 ntBASIC3.79□□□□□ -1.8
O00370 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
O00370 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
O00370 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
O00370 Y_RNA.192-201ENST00000363977 102 ntBASIC3.78□□□□□ -1.8
O00370 SNORA62.3-201ENST00000365110 153 ntBASIC3.78□□□□□ -1.8
O00370 RNU6-657P-201ENST00000383904 107 ntBASIC3.78□□□□□ -1.8
O00370 RNU6-1226P-201ENST00000384317 107 ntBASIC3.78□□□□□ -1.8
O00370 RNU6-921P-201ENST00000384361 107 ntBASIC3.78□□□□□ -1.8
O00370 Y_RNA.493-201ENST00000384422 102 ntBASIC3.78□□□□□ -1.8
O00370 RNU6-441P-201ENST00000384545 106 ntBASIC3.78□□□□□ -1.8
O00370 RNU6-328P-201ENST00000390887 106 ntBASIC3.78□□□□□ -1.8
O00370 AL121978.1-201ENST00000402778 359 ntBASIC3.78□□□□□ -1.8
O00370 RNU4-78P-201ENST00000410940 126 ntBASIC3.78□□□□□ -1.8
O00370 RPL31P2-201ENST00000413849 377 ntBASIC3.78□□□□□ -1.8
O00370 AL008987.1-201ENST00000415528 237 ntBASIC3.78□□□□□ -1.8
O00370 KRR1P1-201ENST00000419430 803 ntBASIC3.78□□□□□ -1.8
O00370 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.78□□□□□ -1.8
O00370 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
O00370 AC005345.1-201ENST00000431868 217 ntBASIC3.78□□□□□ -1.8
O00370 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.78□□□□□ -1.8
O00370 Z73417.1-201ENST00000447373 778 ntBASIC3.78□□□□□ -1.8
O00370 AL034418.1-201ENST00000448675 860 ntBASIC3.78□□□□□ -1.8
O00370 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.78□□□□□ -1.8
O00370 AL136097.1-201ENST00000456945 913 ntBASIC3.78□□□□□ -1.8
O00370 RPL7P15-201ENST00000461190 712 ntBASIC3.78□□□□□ -1.8
O00370 RPL5P24-201ENST00000463742 885 ntBASIC3.78□□□□□ -1.8
O00370 VN1R17P-201ENST00000472048 1090 ntBASIC3.78□□□□□ -1.8
O00370 AC013828.1-201ENST00000481845 158 ntBASIC3.78□□□□□ -1.8
O00370 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.78□□□□□ -1.8
O00370 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.78□□□□□ -1.8
O00370 AC114322.1-201ENST00000506771 926 ntBASIC3.78□□□□□ -1.8
O00370 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.78□□□□□ -1.8
O00370 RNU6-1225P-201ENST00000516336 65 ntBASIC3.78□□□□□ -1.8
O00370 RN7SKP116-201ENST00000516902 319 ntBASIC3.78□□□□□ -1.8
O00370 RN7SKP289-201ENST00000517244 295 ntBASIC3.78□□□□□ -1.8
O00370 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.78□□□□□ -1.8
O00370 AC026407.1-201ENST00000518369 204 ntBASIC3.78□□□□□ -1.8
O00370 AP004371.1-201ENST00000525240 214 ntBASIC3.78□□□□□ -1.8
O00370 AP001636.2-201ENST00000525517 696 ntBASIC3.78□□□□□ -1.8
O00370 PDCL2P2-201ENST00000533651 189 ntBASIC3.78□□□□□ -1.8
O00370 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.78□□□□□ -1.8
O00370 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
O00370 AC092470.1-201ENST00000546187 132 ntBASIC3.78□□□□□ -1.8
O00370 TGIF1P1-201ENST00000558095 802 ntBASIC3.78□□□□□ -1.8
O00370 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.78□□□□□ -1.8
O00370 AL132657.2-201ENST00000564417 358 ntBASIC3.78□□□□□ -1.8
O00370 AP002782.1-201ENST00000623107 614 ntBASIC3.78□□□□□ -1.8
O00370 AP000676.4-201ENST00000624659 623 ntBASIC3.78□□□□□ -1.8
O00370 AC116618.1-201ENST00000634617 774 ntBASIC3.78□□□□□ -1.8
O00370 AC009093.8-201ENST00000641769 292 ntBASIC3.78□□□□□ -1.8
O00370 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
O00370 AC007256.1-201ENST00000392253 2765 ntBASIC3.78□□□□□ -1.8
O00370 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
O00370 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.78□□□□□ -1.81
O00370 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
O00370 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
O00370 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
O00370 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.77□□□□□ -1.81
O00370 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
O00370 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
O00370 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
O00370 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
O00370 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.77□□□□□ -1.81
O00370 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
O00370 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
O00370 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
O00370 Y_RNA.408-201ENST00000383987 102 ntBASIC3.77□□□□□ -1.81
O00370 MIR670-201ENST00000390142 98 ntBASIC3.77□□□□□ -1.81
O00370 RNA5SP171-201ENST00000391071 115 ntBASIC3.77□□□□□ -1.81
O00370 RNU2-28P-201ENST00000410457 189 ntBASIC3.77□□□□□ -1.81
O00370 RNA5SP80-201ENST00000410475 111 ntBASIC3.77□□□□□ -1.81
O00370 RNU6-55P-201ENST00000411092 107 ntBASIC3.77□□□□□ -1.81
O00370 RN7SKP53-201ENST00000411337 315 ntBASIC3.77□□□□□ -1.81
O00370 RNU6-954P-201ENST00000411355 107 ntBASIC3.77□□□□□ -1.81
O00370 AC096632.1-201ENST00000427395 310 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms