Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 RNA5SP505-201ENST00000364748 108 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 RNA5SP37-201ENST00000365420 130 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 RNU6-185P-201ENST00000384421 107 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 SNORD17-201ENST00000390930 237 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 SNORA46.1-201ENST00000391069 153 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 SFR1P1-201ENST00000403720 688 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 RNU2-40P-201ENST00000410833 196 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 GPM6BP3-201ENST00000442797 145 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AC010099.1-201ENST00000455434 375 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AC003982.1-202ENST00000469928 248 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AC126182.1-201ENST00000478134 357 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 GTF2IP9-201ENST00000502460 301 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 RNU1-95P-201ENST00000516357 160 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 RNU1-128P-201ENST00000516704 160 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AC109329.2-201ENST00000519658 482 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AC087272.1-201ENST00000523624 533 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 NCAPGP2-201ENST00000557911 754 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AL138976.2-201ENST00000563989 694 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AGGF1P5-201ENST00000567900 919 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AC023575.1-201ENST00000580510 358 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 MIR4480-201ENST00000582492 71 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AC008749.1-201ENST00000597650 306 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 AC119501.1-201ENST00000603646 475 ntBASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 KPNA2P1-201ENST00000458289 1591 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AC010680.1-201ENST00000590024 3590 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 HMGB1P5-201ENST00000255320 642 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 SNORA3A-201ENST00000364113 130 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 RNU1-85P-201ENST00000364127 164 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 SNORA16B-201ENST00000364674 135 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 SNORD3H-201ENST00000384486 214 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AC007066.1-201ENST00000392902 381 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AL445529.1-201ENST00000398713 389 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 DHFRP5-201ENST00000406944 564 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 RNU2-65P-201ENST00000410162 185 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 HMGN1P24-201ENST00000412282 298 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 DUTP6-201ENST00000425573 462 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AC006455.6-201ENST00000426192 893 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 EIF4EP3-201ENST00000498782 656 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 NDUFB4P2-201ENST00000509515 391 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 SNORA31.8-201ENST00000516327 108 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 MIR514B-201ENST00000516774 80 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 IGHVII-60-1-201ENST00000519079 256 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AC025755.1-201ENST00000521306 278 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 ANP32BP3-201ENST00000559213 706 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 MIR3117-201ENST00000584034 78 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AC002984.1-201ENST00000591692 448 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AC007566.2-201ENST00000603642 413 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 SNORD14A-201ENST00000606526 91 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AL355493.4-201ENST00000618530 292 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AL162373.1-201ENST00000620433 407 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms