Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC114967.1-201ENST00000504890 259 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 VN1R104P-201ENST00000505115 1009 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.56□□□□□ -2
SMKR1H3BMG3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.56□□□□□ -2
SMKR1H3BMG3 SNORA70.19-201ENST00000516717 90 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 SCARNA14-201ENST00000516903 136 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.56□□□□□ -2
SMKR1H3BMG3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.56□□□□□ -2
SMKR1H3BMG3 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC2.56□□□□□ -2
SMKR1H3BMG3 AC087808.1-201ENST00000520501 361 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.56□□□□□ -2
SMKR1H3BMG3 HSPA8P13-201ENST00000523715 472 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.56□□□□□ -2
SMKR1H3BMG3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.56□□□□□ -2
SMKR1H3BMG3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC2.56□□□□□ -2
SMKR1H3BMG3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.56□□□□□ -2
SMKR1H3BMG3 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC2.56□□□□□ -2
SMKR1H3BMG3 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.56□□□□□ -2
SMKR1H3BMG3 MIR3138-201ENST00000585238 82 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 AC022916.3-201ENST00000592961 742 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.56□□□□□ -2
SMKR1H3BMG3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.56□□□□□ -2
SMKR1H3BMG3 HSPE1P7-201ENST00000604681 321 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 TUG1_1.1-201ENST00000610654 145 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 AC120349.2-201ENST00000625002 298 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 AC126544.2-201ENST00000625174 749 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.56□□□□□ -2
SMKR1H3BMG3 WDR75-207ENST00000631047 270 ntTSL 5 BASIC2.56□□□□□ -2
SMKR1H3BMG3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.56□□□□□ -2
SMKR1H3BMG3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.56□□□□□ -2
SMKR1H3BMG3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SMKR1H3BMG3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SMKR1H3BMG3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
SMKR1H3BMG3 AC058791.1-201ENST00000608412 3198 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 AC097714.1-201ENST00000511272 1647 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 AP005901.5-201ENST00000545779 1796 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
SMKR1H3BMG3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SMKR1H3BMG3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SMKR1H3BMG3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SMKR1H3BMG3 DEFB108F-201ENST00000344638 222 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 SNORD56.3-201ENST00000363507 71 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 SNORA73.2-201ENST00000364946 201 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 RNU6-805P-201ENST00000365643 106 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 RNA5SP252-201ENST00000391131 119 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 AC092642.1-201ENST00000392417 425 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
SMKR1H3BMG3 RNU2-43P-201ENST00000410306 190 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 AC069282.1-201ENST00000411911 526 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.55□□□□□ -2
SMKR1H3BMG3 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC2.55□□□□□ -2
SMKR1H3BMG3 AC093578.1-201ENST00000415219 368 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 MTND4P3-201ENST00000417829 541 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 AC245291.1-201ENST00000419501 328 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 GTF2IP23-201ENST00000423746 351 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.55□□□□□ -2
SMKR1H3BMG3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.55□□□□□ -2
SMKR1H3BMG3 RPL23AP82-202ENST00000427528 469 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 AC024082.2-201ENST00000434771 238 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.55□□□□□ -2
SMKR1H3BMG3 AL031183.1-201ENST00000457667 207 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 RPS27P29-201ENST00000463110 252 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 CENPBD1P1-201ENST00000464061 469 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 AP002884.2-201ENST00000471647 395 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
SMKR1H3BMG3 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC2.55□□□□□ -2
SMKR1H3BMG3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.55□□□□□ -2
SMKR1H3BMG3 AC104027.1-201ENST00000521887 300 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 AC239860.2-201ENST00000525886 270 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 DEFB108D-201ENST00000527787 222 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 UBE2NP1-201ENST00000545592 458 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.55□□□□□ -2
SMKR1H3BMG3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.55□□□□□ -2
SMKR1H3BMG3 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.55□□□□□ -2
SMKR1H3BMG3 AL845331.3-202ENST00000562856 261 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.55□□□□□ -2
SMKR1H3BMG3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.55□□□□□ -2
SMKR1H3BMG3 MIR3912-201ENST00000577566 105 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 MIR4277-201ENST00000578298 84 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 AC011260.1-201ENST00000578420 472 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 OR4K8P-201ENST00000578842 1048 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 MAGOH2P-202ENST00000584384 429 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.55□□□□□ -2
SMKR1H3BMG3 AC019193.2-201ENST00000610012 634 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 AC006249.1-201ENST00000621223 471 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 AC073348.1-201ENST00000623002 331 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 AP003476.1-201ENST00000623984 516 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.55□□□□□ -2
SMKR1H3BMG3 MIR1322-201ENST00000638013 71 ntBASIC2.55□□□□□ -2
SMKR1H3BMG3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.55□□□□□ -2
SMKR1H3BMG3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.55□□□□□ -2
SMKR1H3BMG3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.54□□□□□ -2
SMKR1H3BMG3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SMKR1H3BMG3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.54□□□□□ -2
SMKR1H3BMG3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.54□□□□□ -2
SMKR1H3BMG3 AC233263.6-201ENST00000631132 1963 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.54□□□□□ -2
SMKR1H3BMG3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.54□□□□□ -2
SMKR1H3BMG3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
SMKR1H3BMG3 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms