Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC245297.2-201ENST00000610119 565 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AC079395.3-201ENST00000615161 484 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AC025588.4-201ENST00000615802 908 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AC004009.2-201ENST00000623016 728 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AL034408.1-202ENST00000636088 415 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AL079343.1-201ENST00000572358 1771 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 UBE3AP2-201ENST00000429033 2259 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 RNA5SP235-201ENST00000365411 114 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 RNU6-157P-201ENST00000383957 107 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 U1.1-201ENST00000384101 164 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 EI24P1-201ENST00000416584 867 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AIMP1P1-201ENST00000418670 937 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 PTP4A1P5-201ENST00000420305 455 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AL591419.1-201ENST00000427423 339 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AC011742.1-201ENST00000431448 434 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AL138799.3-201ENST00000438968 350 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 NANOGP10-201ENST00000453325 895 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AC097493.1-201ENST00000463958 372 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 HMGB1P25-201ENST00000468402 607 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AC139783.2-201ENST00000504847 1145 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AC005921.1-201ENST00000510589 286 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AC010625.1-201ENST00000511296 403 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 RNU2-58P-201ENST00000516403 183 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AC022861.1-201ENST00000522981 663 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 EEF1B2P4-201ENST00000551398 348 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AC126177.3-201ENST00000551839 688 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 BNIP3P38-201ENST00000601117 544 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AC103881.1-201ENST00000603476 538 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 SNORA51-201ENST00000606420 132 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 TUSC7.1-201ENST00000610969 165 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AC004777.1-201ENST00000624317 287 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 AC027287.1-201ENST00000553115 1453 ntBASIC3.47□□□□□ -1.85
NPIPA3F8WFD2 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.85
NPIPA3F8WFD2 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
NPIPA3F8WFD2 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
NPIPA3F8WFD2 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 BDP1P-201ENST00000582658 1990 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 SNORD3H-201ENST00000384486 214 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 RPL21P17-201ENST00000397467 475 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 AC127526.1-201ENST00000417526 366 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 AC019178.2-201ENST00000423595 505 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 AC017083.1-201ENST00000428093 483 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 RPL21P112-201ENST00000434403 463 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 HSPE1P28-201ENST00000443139 211 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 AL445669.2-201ENST00000454425 421 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 MTCO3P11-201ENST00000455103 774 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 RPL23AP62-201ENST00000463396 453 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 AC069499.1-201ENST00000489433 509 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 RPL7P24-201ENST00000493052 752 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 AC093281.2-201ENST00000510153 597 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 AC006499.2-201ENST00000513470 337 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 RNU6-150P-201ENST00000516237 95 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 RN7SKP287-201ENST00000516546 266 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 SCARNA14-201ENST00000516903 136 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 MRPS36P3-201ENST00000519284 130 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 HSPA8P13-201ENST00000523715 472 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms