Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 OR4F13P-201ENST00000428478 931 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 RPL31P54-201ENST00000429803 370 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 AL513175.1-201ENST00000431492 780 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 RPL37P1-201ENST00000432310 284 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 BMS1P19-201ENST00000433925 393 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 RPS25P9-201ENST00000435591 252 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 HMGB3P30-201ENST00000457863 606 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 AC087385.1-201ENST00000475062 312 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 NCOR1P1-202ENST00000486162 291 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 SAP18P1-201ENST00000512058 390 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 RNU6-202P-201ENST00000515998 96 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 SNORA48.10-201ENST00000516965 160 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 AP000790.1-201ENST00000528891 737 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 AC006539.2-201ENST00000601729 572 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 AL354760.1-201ENST00000608357 643 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 AL136981.2-201ENST00000617319 734 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 FAM157B-203ENST00000639350 358 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 AC106871.1-201ENST00000568324 3102 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SNX9Q9Y5X1 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
SNX9Q9Y5X1 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SNX9Q9Y5X1 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.09□□□□□ -1.76
SNX9Q9Y5X1 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 RNU6-115P-201ENST00000364310 107 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AL031577.2-201ENST00000404133 280 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 PRRC2CP1-201ENST00000404428 159 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AL450338.1-201ENST00000407987 512 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 RNU6ATAC-201ENST00000408749 126 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AC233981.1-201ENST00000423224 461 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 RPP40P1-201ENST00000426762 456 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 IFNNP1-201ENST00000429219 553 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AC010881.1-201ENST00000433830 235 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AC007389.2-201ENST00000434630 306 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 B3GNT2P1-201ENST00000434960 952 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AC241584.1-201ENST00000438469 1241 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 RPL31P3-201ENST00000458430 332 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AC092754.2-201ENST00000463506 460 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 SETP11-201ENST00000473027 690 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AC107982.1-201ENST00000507171 1300 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 PTGES3P3-201ENST00000511479 482 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 FTH1P9-201ENST00000513251 355 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 RNA5SP164-201ENST00000516533 110 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AP001189.2-201ENST00000527320 189 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AC090877.1-201ENST00000561418 344 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AC093519.1-201ENST00000566109 298 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AC017100.2-201ENST00000584628 355 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 WISP1-OT1-201ENST00000602893 642 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AP001981.2-201ENST00000603241 418 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AC069304.2-201ENST00000605154 435 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AC091931.1-201ENST00000623488 728 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AC007494.3-201ENST00000624660 743 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 AC120349.2-201ENST00000625002 298 ntBASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.08□□□□□ -1.76
SNX9Q9Y5X1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AC087359.1-201ENST00000508335 1740 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 RNU6-500P-201ENST00000362349 107 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 ATP5F1P4-201ENST00000397288 746 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 TMSB4XP8-201ENST00000402089 135 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 MTCO3P31-201ENST00000405526 789 ntBASIC4.07□□□□□ -1.76
SNX9Q9Y5X1 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms