Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 UBE2L4-201ENST00000587688 464 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AC119751.7-201ENST00000600494 245 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AC138749.5-201ENST00000611461 208 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AC116165.2-201ENST00000616705 206 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 MIR6130-201ENST00000619419 109 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AL139089.1-201ENST00000620372 975 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AL158801.5-201ENST00000623123 465 ntBASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A3BPQ9Y5P4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 SCN1A-220ENST00000641603 12506 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 AC139769.1-204ENST00000472297 1931 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 XIAPP3-201ENST00000312918 795 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 SNORA62-201ENST00000365493 153 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 RPL7P25-201ENST00000404151 721 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 MTCO2P34-201ENST00000421994 607 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 AL356387.2-201ENST00000422272 243 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 AC012671.1-201ENST00000451912 203 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 snoU109.1-201ENST00000459339 135 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 RAP1BP2-201ENST00000478270 544 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 RPL31P13-201ENST00000484151 370 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 MTCO3P7-201ENST00000510008 774 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 AC026801.2-201ENST00000515352 425 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 RNA5SP497-201ENST00000516081 97 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 IGLVIV-65-201ENST00000517313 360 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 ZNF519P3-201ENST00000557158 1032 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 OR4K8P-201ENST00000578842 1048 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 AC233280.2-201ENST00000603917 1070 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 AC104010.1-201ENST00000616889 150 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 AC092140.2-201ENST00000618027 521 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 AC015967.1-201ENST00000619893 476 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 AC139792.2-201ENST00000624218 587 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 NXPH1-205ENST00000602349 1953 ntBASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL4A3BPQ9Y5P4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 MFSD8-242ENST00000641690 4199 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 RPL32P3-201ENST00000359025 275 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 SNORA31-201ENST00000362607 130 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 RNU6-623P-201ENST00000363143 105 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 Y_RNA.548-201ENST00000384656 105 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 MIR708-201ENST00000390708 88 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 RNU2-43P-201ENST00000410306 190 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 HMGN1P24-201ENST00000412282 298 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 RPL21P108-201ENST00000413857 481 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 AL353777.1-201ENST00000425552 326 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 RPL35AP22-201ENST00000436855 335 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 RPL23AP43-201ENST00000446445 471 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 AC082651.2-201ENST00000496833 166 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 MLLT10P2-201ENST00000506434 249 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 AC113430.1-201ENST00000506872 718 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 AC022483.1-201ENST00000514020 567 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 AC006362.1-201ENST00000567392 174 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 AC004908.2-201ENST00000609090 574 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 AC083809.1-201ENST00000615051 472 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 AC010149.2-201ENST00000637608 315 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms