Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AC010625.1-201ENST00000511296 403 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 RNA5SP468-201ENST00000516782 93 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AC007991.1-201ENST00000522680 631 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 SYF2P1-201ENST00000550658 413 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 EEF1B2P4-201ENST00000551398 348 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AL389895.1-201ENST00000554127 252 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AL132857.1-201ENST00000555180 708 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AC079171.1-201ENST00000568788 914 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AC020914.4-201ENST00000597690 277 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AF131215.7-201ENST00000602443 707 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 BNIP3P11-201ENST00000603878 563 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AC011468.4-201ENST00000603942 409 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AC104662.1-201ENST00000604448 511 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AC091946.2-201ENST00000606105 291 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AC106052.1-201ENST00000608029 497 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AC027449.1-201ENST00000608890 407 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AC005332.6-201ENST00000613178 446 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AC023158.2-201ENST00000614876 543 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 MTND4P10-201ENST00000446199 1363 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 PRO1804-201ENST00000623780 2050 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 Y_RNA.25-201ENST00000362528 102 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 RNU6-989P-201ENST00000362756 107 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 RNU6-629P-201ENST00000384061 103 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 RNU4-65P-201ENST00000410473 140 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 TOMM22P1-201ENST00000418578 312 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AL158156.1-201ENST00000422509 473 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AC092648.1-201ENST00000425870 423 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 RPL23AP74-201ENST00000437246 471 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 RPL21P23-201ENST00000446654 460 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 snoU13.4-201ENST00000458916 104 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 MTCYBP16-201ENST00000509187 1129 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 GMPSP1-201ENST00000514075 579 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 RNU6-1261P-201ENST00000517194 104 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 HIGD1AP10-201ENST00000527837 282 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 OR5B10P-201ENST00000532869 642 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AC018630.1-201ENST00000541376 925 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AC006960.3-201ENST00000561845 705 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AC020914.6-201ENST00000594327 272 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AC021749.1-201ENST00000604322 607 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AC010738.1-201ENST00000604970 987 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AL050303.3-201ENST00000613704 284 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AC243312.2-201ENST00000623340 601 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AP001002.2-201ENST00000625137 386 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AC244258.1-201ENST00000637553 1071 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 AC138915.3-201ENST00000562908 1389 ntBASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA1Q9Y5H4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA1Q9Y5H4 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA1Q9Y5H4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.69□□□□□ -1.82
PCDHGA1Q9Y5H4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA1Q9Y5H4 Y_RNA.111-201ENST00000363248 100 ntBASIC3.69□□□□□ -1.82
PCDHGA1Q9Y5H4 RNA5SP267-201ENST00000364893 126 ntBASIC3.69□□□□□ -1.82
PCDHGA1Q9Y5H4 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA1Q9Y5H4 RNA5SP129-201ENST00000410276 118 ntBASIC3.69□□□□□ -1.82
PCDHGA1Q9Y5H4 AL356320.2-201ENST00000417263 507 ntBASIC3.69□□□□□ -1.82
PCDHGA1Q9Y5H4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDHGA1Q9Y5H4 AL513175.2-201ENST00000422071 443 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms