Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 SNORA74D-201ENST00000516404 141 ntBASIC3.39□□□□□ -1.87
CDH9Q9ULB4 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH9Q9ULB4 IGHV3-76-201ENST00000522465 295 ntBASIC3.39□□□□□ -1.87
CDH9Q9ULB4 AP001207.1-201ENST00000524051 481 ntBASIC3.39□□□□□ -1.87
CDH9Q9ULB4 AC109635.4-202ENST00000531666 412 ntBASIC3.39□□□□□ -1.87
CDH9Q9ULB4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.39□□□□□ -1.87
CDH9Q9ULB4 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH9Q9ULB4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH9Q9ULB4 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH9Q9ULB4 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH9Q9ULB4 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH9Q9ULB4 AC025588.3-201ENST00000604182 274 ntBASIC3.39□□□□□ -1.87
CDH9Q9ULB4 AC124312.4-201ENST00000605533 310 ntBASIC3.39□□□□□ -1.87
CDH9Q9ULB4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH9Q9ULB4 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH9Q9ULB4 AC026422.1-201ENST00000623961 452 ntBASIC3.39□□□□□ -1.87
CDH9Q9ULB4 AC098679.5-201ENST00000624394 571 ntBASIC3.39□□□□□ -1.87
CDH9Q9ULB4 AC092184.1-201ENST00000625042 715 ntBASIC3.39□□□□□ -1.87
CDH9Q9ULB4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH9Q9ULB4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
CDH9Q9ULB4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDH9Q9ULB4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH9Q9ULB4 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AL512283.1-201ENST00000606756 1384 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 OR1S2-201ENST00000302592 978 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 RNU6-619P-201ENST00000365146 108 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 RNU6-1181P-201ENST00000384191 106 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 SNORA7.4-201ENST00000384249 137 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 MIR483-201ENST00000385070 76 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 GSTA8P-201ENST00000404253 637 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 RNU4-78P-201ENST00000410940 126 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 RNU2-71P-201ENST00000411395 189 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AC007899.1-201ENST00000412776 775 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 DEFB130D-201ENST00000426866 237 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 OR51B8P-201ENST00000449892 769 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AC115115.1-201ENST00000449927 248 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 HMGN2P16-201ENST00000456802 261 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AC010401.1-201ENST00000463867 348 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AP002884.2-201ENST00000471647 395 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 OR5H5P-201ENST00000503164 928 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 RN7SKP289-201ENST00000517244 295 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 RPL12P22-201ENST00000519073 490 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AP001636.2-201ENST00000525517 696 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 SYF2P1-201ENST00000550658 413 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 MTCO1P40-201ENST00000574371 625 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AC098483.2-201ENST00000603158 454 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AC009948.4-201ENST00000604692 675 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 AC073476.4-201ENST00000628409 72 ntBASIC3.38□□□□□ -1.87
CDH9Q9ULB4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.38□□□□□ -1.87
CDH9Q9ULB4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC116096.1-201ENST00000566804 2314 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 RNA5SP295-201ENST00000362655 121 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 SNORA48.8-201ENST00000391324 134 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 RNA5SP31-201ENST00000411144 127 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AL590103.1-201ENST00000434488 307 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AL158053.1-201ENST00000441503 453 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 MOB1AP2-201ENST00000446060 614 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 RPL7P59-201ENST00000447700 943 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AL050341.1-201ENST00000447743 313 ntBASIC3.37□□□□□ -1.87
CDH9Q9ULB4 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH9Q9ULB4 AC104073.1-201ENST00000451988 151 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms