Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC122108.2-201ENST00000611946 526 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 AL031667.3-201ENST00000620124 655 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 CR392039.5-201ENST00000623201 510 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 PCMTD1P7-201ENST00000634506 357 ntBASIC3.99□□□□□ -1.77
SIX4Q9UIU6 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SIX4Q9UIU6 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 AC015813.6-201ENST00000624409 5808 ntBASIC3.98□□□□□ -1.77
SIX4Q9UIU6 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 RNU6-500P-201ENST00000362349 107 ntBASIC3.98□□□□□ -1.77
SIX4Q9UIU6 RNU6-444P-201ENST00000383988 108 ntBASIC3.98□□□□□ -1.77
SIX4Q9UIU6 SNORA26.8-201ENST00000391306 124 ntBASIC3.98□□□□□ -1.77
SIX4Q9UIU6 CYCSP45-201ENST00000402289 315 ntBASIC3.98□□□□□ -1.77
SIX4Q9UIU6 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 MTND1P20-201ENST00000430341 950 ntBASIC3.98□□□□□ -1.77
SIX4Q9UIU6 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 AL445669.2-201ENST00000454425 421 ntBASIC3.98□□□□□ -1.77
SIX4Q9UIU6 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.98□□□□□ -1.77
SIX4Q9UIU6 OR4G11P-201ENST00000492842 939 ntBASIC3.98□□□□□ -1.77
SIX4Q9UIU6 AC004069.2-201ENST00000505438 1114 ntBASIC3.98□□□□□ -1.77
SIX4Q9UIU6 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 VWA8P1-201ENST00000510889 176 ntBASIC3.98□□□□□ -1.77
SIX4Q9UIU6 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 OR7K1P-201ENST00000546439 926 ntBASIC3.98□□□□□ -1.77
SIX4Q9UIU6 AC007115.1-201ENST00000546853 234 ntBASIC3.98□□□□□ -1.77
SIX4Q9UIU6 AC023161.2-201ENST00000551218 780 ntBASIC3.98□□□□□ -1.77
SIX4Q9UIU6 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 AC103987.3-201ENST00000582071 292 ntBASIC3.98□□□□□ -1.77
SIX4Q9UIU6 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 MIR3158-1-201ENST00000583596 81 ntBASIC3.98□□□□□ -1.77
SIX4Q9UIU6 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 AC010680.3-201ENST00000604215 520 ntBASIC3.98□□□□□ -1.77
SIX4Q9UIU6 AC098679.4-201ENST00000624241 654 ntBASIC3.98□□□□□ -1.77
SIX4Q9UIU6 AC091905.1-201ENST00000624400 311 ntBASIC3.98□□□□□ -1.77
SIX4Q9UIU6 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 ZNF833P-201ENST00000424938 1494 ntBASIC3.98□□□□□ -1.77
SIX4Q9UIU6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.98□□□□□ -1.77
SIX4Q9UIU6 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AL390237.1-201ENST00000404226 1415 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AC090229.1-201ENST00000590983 1609 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 RNU6-251P-201ENST00000363235 104 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 RNU6-657P-201ENST00000383904 107 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 SNORA5A-201ENST00000384111 134 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 SNORD116-4-201ENST00000384733 96 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 MT-TH-201ENST00000387441 69 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AL035423.1-201ENST00000420331 213 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 RPL23AP35-201ENST00000451906 501 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 RPL18AP17-201ENST00000455326 198 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AC072039.1-201ENST00000477611 581 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AL024509.2-201ENST00000493462 493 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 MTCYBP37-201ENST00000510642 1133 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AC018797.3-201ENST00000513388 1241 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 RNU6-488P-201ENST00000515918 99 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AP000790.1-201ENST00000528891 737 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AC245389.1-201ENST00000605141 529 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AL391497.1-201ENST00000608671 547 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AC090425.2-201ENST00000608818 501 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms