Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL356968.1-201ENST00000416622 474 ntBASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 AC008280.1-201ENST00000418851 412 ntBASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 MTCYBP24-201ENST00000420387 1106 ntBASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 RPL23AP22-201ENST00000437556 453 ntBASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 AL050341.1-201ENST00000447743 313 ntBASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 RPL5P24-201ENST00000463742 885 ntBASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 RPL21P104-201ENST00000464143 478 ntBASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 RPS4XP13-201ENST00000483219 789 ntBASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 AC104629.1-201ENST00000494226 508 ntBASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 AC110794.1-201ENST00000505816 425 ntBASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 AC110760.3-202ENST00000515177 371 ntBASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 RNU6-202P-201ENST00000515998 96 ntBASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 HIGD1AP1-201ENST00000550979 275 ntBASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 CR383656.14-201ENST00000551951 406 ntBASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 CLIC4P2-201ENST00000601934 717 ntBASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 HMGN2P28-201ENST00000606102 262 ntBASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 AC109809.1-201ENST00000619665 545 ntBASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 AC023510.2-201ENST00000622162 746 ntBASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 AC118273.1-201ENST00000525324 3006 ntBASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 PABPC1P7-201ENST00000413177 1513 ntBASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 RNU1-70P-201ENST00000362618 164 ntBASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 SNORD56.3-201ENST00000363507 71 ntBASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 RNU6-525P-201ENST00000363685 104 ntBASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 SNORA48.2-201ENST00000390926 124 ntBASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 SNORA48.8-201ENST00000391324 134 ntBASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 RPL22P22-201ENST00000395439 379 ntBASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 HMGB1P12-201ENST00000438594 598 ntBASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 ATP5C1P1-201ENST00000441945 895 ntBASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 OR51B8P-201ENST00000449892 769 ntBASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 PRDX3P4-201ENST00000470828 747 ntBASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 AC015908.1-201ENST00000478739 476 ntBASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 AC108078.3-201ENST00000502633 489 ntBASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 AC114967.1-201ENST00000504890 259 ntBASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 AC010198.2-201ENST00000550612 259 ntBASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 SNRPGP15-201ENST00000600149 222 ntBASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 AC006023.2-201ENST00000609916 167 ntBASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 ELL2P4-201ENST00000446870 1376 ntBASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP2Q9UDT6 RNA5SP383-201ENST00000362934 120 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 RNA5SP374-201ENST00000362939 125 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 RNU6-468P-201ENST00000384003 109 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 OR51A3P-201ENST00000413596 924 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 RPS3AP9-201ENST00000417027 792 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 AC244098.2-201ENST00000422068 99 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 AC246680.2-201ENST00000422106 389 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 AL512649.1-201ENST00000428997 581 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 ISCA1P2-201ENST00000438679 421 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 AL662791.1-201ENST00000441992 928 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 RPS15AP1-201ENST00000457423 391 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 AC087879.1-201ENST00000474343 374 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 DSTNP2-201ENST00000504533 515 ntBASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.84□□□□□ -1.79
CLIP2Q9UDT6 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms