Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC233728.2-201ENST00000425348 757 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 RPL21P18-201ENST00000469899 480 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 BLNK-209ENST00000495266 440 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 CAB39P1-201ENST00000502277 460 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 AC111000.2-201ENST00000507775 550 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 SNORA31.20-201ENST00000517111 133 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 RN7SKP57-201ENST00000517248 293 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 AC019227.1-201ENST00000526902 510 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 MIR5195-201ENST00000583555 115 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 AC024153.1-201ENST00000603103 365 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 OR2BH1P-201ENST00000608850 864 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 AC131902.3-201ENST00000611767 581 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 AL110115.1-201ENST00000614396 364 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 AL162274.2-201ENST00000614406 332 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 AC231759.1-201ENST00000616455 597 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 ATP5A1P2-202ENST00000616464 443 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 AC090617.7-201ENST00000623952 126 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 AP003122.5-201ENST00000527668 3766 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 AC009487.2-201ENST00000420969 6821 ntBASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 AL359893.1-201ENST00000447628 1580 ntBASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 RNU6-1243P-201ENST00000364028 107 ntBASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 RNU1-140P-201ENST00000365040 165 ntBASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 RPS3AP26-201ENST00000398259 784 ntBASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 AL512633.1-201ENST00000399931 655 ntBASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 EEF1A1P41-201ENST00000414667 207 ntBASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 KRR1P1-201ENST00000419430 803 ntBASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 RFESDP1-201ENST00000422350 461 ntBASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 AC112653.1-201ENST00000443851 386 ntBASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 SUMO1P1-201ENST00000497904 306 ntBASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 ARL4AP2-201ENST00000507378 601 ntBASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 AC010374.2-201ENST00000512933 535 ntBASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 AC091826.1-201ENST00000514065 313 ntBASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 OR4G1P-201ENST00000588632 938 ntBASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 AC005046.1-201ENST00000608515 625 ntBASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 AL391597.1-201ENST00000618707 694 ntBASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 AC090897.3-201ENST00000636973 1157 ntBASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 AC073346.2-201ENST00000624724 2058 ntBASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 ASNSP3-201ENST00000451989 1306 ntBASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 AL136520.1-201ENST00000600311 1322 ntBASIC2.67□□□□□ -1.98
VPS29Q9UBQ0 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 METTL21EP-201ENST00000298105 713 ntBASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 OR5H2-201ENST00000355273 945 ntBASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 SNORD46.1-201ENST00000364139 104 ntBASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 RNU6-837P-201ENST00000391056 108 ntBASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 AC093156.1-201ENST00000440382 670 ntBASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 COX6CP2-201ENST00000444980 225 ntBASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 AL445669.2-201ENST00000454425 421 ntBASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 AP002345.1-201ENST00000456493 928 ntBASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 snoU13.3-201ENST00000459441 104 ntBASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 AC010301.1-201ENST00000473936 355 ntBASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 AC103975.1-201ENST00000482506 483 ntBASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 MIR4325-201ENST00000583049 90 ntBASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 AC012468.1-201ENST00000604888 430 ntBASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 AC008962.1-201ENST00000605729 304 ntBASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 AC069234.5-201ENST00000611056 416 ntBASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 AL392048.1-201ENST00000613946 534 ntBASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 AC024023.1-201ENST00000624530 922 ntBASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms