Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4□□□□□ -1.77
HCN3Q9P1Z3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HCN3Q9P1Z3 ZNF33BP1-201ENST00000452497 1834 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 ELL2P3-201ENST00000457883 1602 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
HCN3Q9P1Z3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HCN3Q9P1Z3 AC090337.1-201ENST00000579651 2074 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 AL121657.1-201ENST00000327215 531 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 MT-TH-201ENST00000387441 69 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 SKINT1L-201ENST00000401057 817 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 RAC1P3-201ENST00000416129 580 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4□□□□□ -1.77
HCN3Q9P1Z3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4□□□□□ -1.77
HCN3Q9P1Z3 MTND4LP10-201ENST00000435146 291 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 SETP8-201ENST00000435341 628 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 LARP1BP3-201ENST00000437229 869 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4□□□□□ -1.77
HCN3Q9P1Z3 AC092754.2-201ENST00000463506 460 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 AC091564.1-201ENST00000464563 479 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4□□□□□ -1.77
HCN3Q9P1Z3 AC006499.6-201ENST00000511169 607 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4□□□□□ -1.77
HCN3Q9P1Z3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4□□□□□ -1.77
HCN3Q9P1Z3 PHBP17-201ENST00000528576 541 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 AL356057.1-201ENST00000533798 831 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 TOMM20P2-201ENST00000540082 421 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 AC084824.1-201ENST00000550917 1005 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4□□□□□ -1.77
HCN3Q9P1Z3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4□□□□□ -1.77
HCN3Q9P1Z3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4□□□□□ -1.77
HCN3Q9P1Z3 MIR544B-201ENST00000582372 78 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4□□□□□ -1.77
HCN3Q9P1Z3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4□□□□□ -1.77
HCN3Q9P1Z3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4□□□□□ -1.77
HCN3Q9P1Z3 AL590229.1-201ENST00000603497 542 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 AC026368.1-201ENST00000614934 690 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 MIR7844-201ENST00000616161 122 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4□□□□□ -1.77
HCN3Q9P1Z3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
HCN3Q9P1Z3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HCN3Q9P1Z3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4□□□□□ -1.77
HCN3Q9P1Z3 AP001486.2-201ENST00000561652 5113 ntBASIC4□□□□□ -1.77
HCN3Q9P1Z3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4□□□□□ -1.77
HCN3Q9P1Z3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 AC244517.1-201ENST00000606030 2086 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 PABPC1P9-201ENST00000426076 1612 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 ZNF833P-201ENST00000424938 1494 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 RNU6-97P-201ENST00000363387 104 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 RNU6-501P-201ENST00000364072 100 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 RNU6-853P-201ENST00000364306 107 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 Y_RNA.234-201ENST00000364409 97 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 RN7SKP266-201ENST00000410232 287 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 RNU6-712P-201ENST00000410558 100 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 RN7SKP182-201ENST00000410772 298 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 AL365338.1-201ENST00000422282 858 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 BTF3P10-201ENST00000433415 495 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 RPL23AP46-201ENST00000438548 490 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 ISCA1P2-201ENST00000438679 421 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 AL512286.1-201ENST00000439244 400 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 HMGN2P21-201ENST00000447764 270 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 AL353691.1-201ENST00000451332 387 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 OR6K1P-201ENST00000456766 971 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 AC091153.1-201ENST00000466297 402 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 SETP11-201ENST00000473027 690 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 RNA5SP73-201ENST00000516744 108 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 AC105233.3-201ENST00000531125 744 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 AL353997.4-201ENST00000586196 166 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 SNRPGP15-201ENST00000600149 222 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 XIAPP1-201ENST00000603162 600 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 AC012669.1-201ENST00000603209 283 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 AC007390.2-201ENST00000606229 3803 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 AC092653.1-201ENST00000608509 531 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms